RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Plch1Q4KWH5 1682 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Scgb1b12A0A087WP21 93 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc9a6A1L3P4 702 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1056A2AVY0 313 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Serpinb3cA2RSF9 386 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Apba1B2RUJ5 842 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cntnap3E9PY62 1287 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm8094K7N6U8 211 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Hmox2O70252 315 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Usp2O88623 613 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Igsf11P0C673 428 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 UrosP51163 265 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tbc1d10aP58802 500 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Shcbp1lQ3TTP0 639 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Brf2Q3UAW9 420 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm732Q3V0P9 516 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ggnbp2Q5SV77 696 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Serinc4Q5XK03 492 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Scara3Q8C850 606 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Creb5Q8K1L0 357 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dennd1aQ8K382 1016 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ces4aQ8R0W5 563 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Vmn1r17Q8R2D8 303 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nup85Q8R480 656 aaKnown RBP9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sgms1Q8VCQ6 419 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pofut1Q91ZW2 393 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rev1Q920Q2 1249 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rab30Q923S9 203 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zdhhc13Q9CWU2 622 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mettl15Q9DCL4 406 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olr1Q9EQ09 363 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trip6Q9Z1Y4 480 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Col11a2Q64739 1736 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Osbpl9A2A8Z1 736 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pramef17A2ASJ1 475 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Supt3B0QZW4 406 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sult2a3D3Z1W5 285 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cyp4f17G3UW78 524 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Hk2O08528 917 aaKnown RBP9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Srsf5O35326 269 aaKnown RBP9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dgcr6O35347 198 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cdk14O35495 469 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 ApoeP08226 311 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rab24P35290 203 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 GalP47212 124 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Serping1P97290 504 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Vipr1P97751 459 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 rp9P97762 213 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Scn1bP97952 218 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tmem237Q3V0J1 427 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Vmn1r209Q5NC97 312 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccdc157Q5SPX1 718 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dvl3Q61062 716 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Stk40Q7TNL3 435 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sytl5Q80T23 753 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cyp26b1Q811W2 512 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nyap2Q8BM65 682 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 NdnfQ8C119 568 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ipo13Q8K0C1 963 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trib1Q8K4K4 372 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 ApehQ8R146 732 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc35c2Q8VCX2 364 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1094Q8VF13 330 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr347Q8VGK2 312 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pcdha9Q91Y11 979 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nip7Q9CXK8 180 aaKnown RBP9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Eef1akmt2Q9D853 244 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 GmfgQ9ERL7 142 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dmap1Q9JI44 468 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Psma6Q9QUM9 246 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Clcn5Q9WVD4 746 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Kcnh3Q9WVJ0 1095 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zfyve9A2A8R0 1397 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Usp19Q3UJD6 1360 aa9.15□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ttll11A4Q9F4 727 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdh9F8VPK8 1237 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 PparaP23204 468 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Sox6P40645 827 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc45a2P58355 530 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Usp39Q3TIX9 564 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ulk3Q3U3Q1 472 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 C1rlQ3UZ09 482 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Xkr9Q5GH62 373 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CilpQ66K08 1184 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmcc1Q69ZZ6 649 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr834Q7TRG8 312 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ankrd45Q810N6 248 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pi4kbQ8BKC8 816 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Phldb2Q8K1N2 1249 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Actr8Q8R2S9 624 aaKnown RBP9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr806Q8VFI2 313 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr805Q8VFI4 319 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdh18Q8VHR0 1134 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mrpl15Q9CPR5 295 aaKnown RBP9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mrpl44Q9CY73 333 aaKnown RBP9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 2310002L09RikQ9D7L5 217 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmem68Q9D850 329 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ctag2Q9D9S4 219 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ceacam13Q9DAT7 263 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Serpinb9bQ9DAV6 377 aa9.15□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms