RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Acad10Q8K370 1069 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gsg1Q8R1W2 324 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rmnd5bQ91YQ7 393 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gadd45gip1Q9CR59 222 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 S100pbpQ9D5K4 396 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 TrirQ9D735 173 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Homer2Q9QWW1 354 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rnf11Q9QYK7 154 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Trpv2Q9WTR1 756 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm28168A0A087WNP1 180 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm21731A0A286YDE9 180 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 SmoktcrA2KF29 484 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm10406A6NAS4 205 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3373A6NAS7 205 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3252E9PUT9 216 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3002E9PW72 216 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3298E9PW80 205 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3468E9QAJ8 216 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3667K7N757 205 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Pfdn2O70591 154 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mov10P23249 1004 aaKnown RBP8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Hnf1bP27889 558 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ccr1P51675 355 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 EsrrgP62509 458 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Itga4Q00651 1039 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Gm3558Q5FWC9 205 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Fbxo39Q5NBU5 443 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 PfplQ5RKV8 702 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tcaf3Q6QR59 914 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Nars2Q8BGV0 477 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Pgm5Q8BZF8 567 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Scara3Q8C850 606 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Fnbp1lQ8K012 605 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Adam32Q8K410 754 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Zfp566Q8VCI1 386 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Vangl2Q91ZD4 521 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tma16Q9CR02 221 aaKnown RBP8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ccdc77Q9CZH8 489 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Mrpl17Q9D8P4 176 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Cyp4f14Q9EP75 524 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 AadatQ9WVM8 425 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Wdr49A0A0N4SUK7 710 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 C7D3YXF5 845 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Adcy1O88444 1118 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 H2-Eb1P04230 264 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 GzmdP11033 252 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Fcer2P20693 331 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Lta4hP24527 611 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Wnt3aP27467 352 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ptpn1P35821 432 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Btbd3P58545 530 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rbm44Q3V089 1013 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Papss1Q60967 624 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 MogQ61885 246 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Pim2Q62070 370 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc39a14Q75N73 489 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc16a9Q7TM99 508 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Arhgap15Q811M1 481 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Tmem198Q8BG75 360 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Clptm1lQ8BXA5 539 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Nmur2Q8BZ39 395 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc24a5Q8C261 501 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 SrrdQ8K2M3 249 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Slc36a1Q8K4D3 475 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Nrbf2Q8VCQ3 287 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 IrgqQ8VIM9 583 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Rbm47Q91WT8 590 aaKnown RBP8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 GOLGA7BQ9D428 167 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 CenpkQ9ESN5 271 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Ap1m2Q9WVP1 423 aa8.34□□□□□ -1.07
Cdc40-201ENSMUST00000044166 Olfr671A0A1B0GSN5 317 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Vmn1r39G3UWE6 305 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 RapsnP12672 412 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Hmgb2P30681 210 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Drd4P51436 387 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Adamts10P58459 1104 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Arl4aP61213 200 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pdcd1Q02242 288 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pecam1Q08481 727 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Cd36Q08857 472 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 SobpQ0P5V2 864 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Sarm1Q6PDS3 724 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Arhgap26Q6ZQ82 814 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Olfr26Q7TRB7 308 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Zbtb24Q80X44 710 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gjc2Q8BQU6 440 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Bri3bpQ8BXV2 253 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Ppp4r4Q8C0Y0 875 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 AA792892Q8C6S1 278 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Slc30a5Q8R4H9 761 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 HnrnpabQ99020 285 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 KlbQ99N32 1043 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Pkp2Q9CQ73 795 aaKnown RBP8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 PmpcbQ9CXT8 489 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Iigp1Q9QZ85 413 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Morf4l2Q9R0Q4 288 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 NfkbiaQ9Z1E3 314 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Gria4Q9Z2W8 902 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Megf6Q80V70 1572 aa8.33□□□□□ -1.08
Cdc40-201ENSMUST00000044166 Lrrc73B2RWC4 316 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms