RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gtf2ird2Q99NI3 936 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hormad1Q9D5T7 392 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Epm2aQ9WUA5 330 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm4869A0A1B0GSG7 984 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 RerglB2RVE2 204 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm8237E9Q257 205 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Klrk1O54709 232 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cd4P06332 457 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Kcnj2P35561 428 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Apoa1Q00623 264 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Znf367Q0VDT2 340 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Sel1l2Q3V172 688 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cyb5d1Q5NCY3 228 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Atl1Q8BH66 558 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc45a1Q8BIV7 751 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cers6Q8C172 384 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Kctd12bQ8C7J6 292 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dennd1cQ8CFK6 786 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dnm1lQ8K1M6 742 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rbm47Q91WT8 590 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 DarsQ922B2 501 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Atp6ap2Q9CYN9 350 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ribc2Q9D4Q1 309 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rexo2Q9D8S4 237 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 IgtpQ9DCE9 423 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Wdr12Q9JJA4 423 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vnn3Q9QZ25 500 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Bscl2Q9Z2E9 383 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zfp612A0A1D5RMC2 672 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ptchd4B9EKX1 904 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 TfamP40630 243 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PctpP53808 214 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm8773Q3UQ24 132 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fbxw11Q5SRY7 542 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nr1h2Q60644 446 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gstt1Q64471 240 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Naaladl1Q7M758 745 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ubap1Q8BH48 502 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fbxo38Q8BMI0 1194 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dmtf1Q8CE22 761 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ago1Q8CJG1 857 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Usp45Q8K387 813 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 RhoqQ8R527 205 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr356Q8VFP5 315 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr330Q8VGD9 315 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pwp1Q99LL5 501 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PompQ9CQT5 141 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gemin6Q9CX53 166 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ndel1Q9ERR1 345 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Oxct2bQ9ESL0 520 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Oxct2aQ9JJN4 520 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Il22Q9JJY9 179 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Msl3Q9WVG9 525 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm28961A0A087WPA5 222 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm21858A0A087WQ24 222 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Glipr1l3A0A1W2P7V2 236 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rgsl1H3BL40 1073 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Il4i1O09046 630 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 MaptP10637 733 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ndst2P52850 883 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 GapdhsQ64467 440 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zswim9Q6DI92 447 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr1062Q7TR71 315 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mfn2Q80U63 757 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Trnp1Q80ZI1 223 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Il17reQ8BH06 637 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hspa13Q8BM72 471 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zbtb33Q8BN78 671 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Agbl2Q8CDK2 862 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc25a3Q8VEM8 357 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Actrt2Q9D9L5 377 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nusap1Q9ERH4 427 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Acox2Q9QXD1 681 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 HaspinQ9Z0R0 754 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pabpc1P29341 636 aaKnown RBP10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tbxas1P36423 533 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ube2e3P52483 207 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Meaf6Q2VPQ9 191 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 CenplQ3U3S3 329 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ntrk1Q3UFB7 799 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mief1Q8BGV8 463 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr1302Q8VGE9 315 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Trem2Q99NH8 227 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ddi1Q9DAF3 408 aa10.36□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Skint11A7XV14 364 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fam46dB1ATX6 390 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ifit3bE9PV48 403 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr220E9Q050 325 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn2r11E9Q4X4 861 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 NfycP70353 335 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tarbp2P97473 365 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 AxlQ00993 888 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Wasf2Q8BH43 497 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 DseQ8BLI4 958 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pcyox1lQ8C7K6 495 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tsga13Q9DA17 273 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Arid3bQ9Z1N7 568 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr1023A2ASU6 311 aa10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Xpnpep3B7ZMP1 506 aaKnown RBP10.35□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Bnc1O35914 961 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms