RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Unc93b1Q8VCW4 598 aa18.89■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 MiosQ8VE19 875 aa18.89■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ppa2Q91VM9 330 aa18.89■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 4930519G04RikQ9CPT7 205 aa18.89■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Mrpl17Q9D8P4 176 aa18.89■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Med20Q9R0X0 212 aa18.89■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Usp51B1AY15 661 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Dsg3O35902 993 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 P01669 111 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ptger1P35375 405 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Hmx2P43687 273 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Fam120bQ6RI63 786 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Fndc11Q80WB0 326 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Rbm22Q8BHS3 420 aaKnown RBP18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Castor2Q8CAB8 329 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Golm1Q91XA2 393 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Smim11aQ99J19 55 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Dlgap1Q9D415 992 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ptk2bQ9QVP9 1009 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Bnip3lQ9Z2F7 218 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm6370A0A0G2JGX9 315 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Skint6A7XUZ6 1240 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cyp2w1E9Q816 493 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm6309L7N481 315 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ctbp1O88712 441 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cyp2a12P56593 492 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Vps51Q3UVL4 782 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Rps27lQ6ZWY3 84 aaKnown RBP18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Tecpr1Q80VP0 1166 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Tmem209Q8BRG8 561 aaKnown RBP18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 MydgfQ9CPT4 166 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 PclafQ9CQX4 110 aaKnown RBP18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Oxct1Q9D0K2 520 aaKnown RBP18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cdkn2aipnlQ9D211 116 aaKnown RBP18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 4930524N10RikQ9D519 233 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Syvn1Q9DBY1 612 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Stx12Q9ER00 274 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Maged2Q9ER67 616 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Itgb1bp2Q9R000 350 aa18.88■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm6509A0A0J9YUV1 481 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm12248A0A1W2P8B8 313 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Mtx3D3YTP3 312 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm6351K9J7D1 481 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Per3O70361 1113 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Hoxc8P09025 242 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Psmd3P14685 530 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 AurkaP97477 395 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Adra1dP97714 562 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gdf3Q07104 366 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Brms1lQ3U1T3 323 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cfap52Q5F201 620 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Itpk1Q8BYN3 419 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Sfrp1Q8C4U3 314 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Vps39Q8R5L3 886 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 GcshQ91WK5 170 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Rwdd4Q9CPR1 188 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cnot11Q9CWN7 505 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Scamp5Q9JKD3 235 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Trpc7Q9WVC5 862 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Wdr81Q5ND34 1934 aa18.87■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm44511A0A0N4SW10 223 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Eif2b3B1AUN2 452 aaKnown RBP18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Sgo2bJ3QMK1 1167 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Fgf10O35565 209 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Adcy1O88444 1118 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Klrb1bP27812 223 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Jak1P52332 1153 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Fscn2Q32M02 492 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm5431Q5NCB3 844 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Dyrk2Q5U4C9 599 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Lcp1Q61233 627 aaKnown RBP18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 RbfaQ6P3B9 350 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Olfr1046Q7TR79 316 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Slc44a2Q8BY89 706 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Nkiras1Q8CEC5 192 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Acsm2Q8K0L3 575 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Creb5Q8K1L0 357 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Mark1Q8VHJ5 795 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Sytl2Q99N50 950 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Tmem80Q9D3H0 123 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Tnfaip8l2Q9D8Y7 184 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Jph2Q9ET78 696 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Homer2Q9QWW1 354 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Zc3h4Q6ZPZ3 1304 aaKnown RBP18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Gm5751A2AHC8 147 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Vmn1r2A2AMT6 306 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ankrd16A2AS55 361 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ssxb8B1AY40 170 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Grip2G3XA20 1042 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cd151O35566 253 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 NfkbieO54910 364 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Krt4P07744 525 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Serpinb2P12388 415 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ckmt1P30275 418 aaKnown RBP18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Fam129aQ3UW53 926 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Msi1Q61474 362 aaKnown RBP18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 4930503B20RikQ80ZP0 234 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 R3hcc1lQ8BJM3 775 aaKnown RBP18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Ticam2Q8BJQ4 232 aa18.86■□□□□ 0.61
Shkbp1-201ENSMUST00000003857 Cep57Q8CEE0 500 aa18.86■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 83.3 ms