RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 AGAP2Q99490 1192 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 NOL11Q9H8H0 719 aaKnown RBP16.78■□□□□ 0.28
SCARB2-210ENST00000638567 UXTQ9UBK9 157 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-210ENST00000638567 PCDHB12Q9Y5F1 795 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 SCN11AQ9UI33 1791 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 ROBO1Q9Y6N7 1651 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 AZIN1O14977 448 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 KPNA1P52294 538 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-210ENST00000638567 ST8SIA6P61647 398 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 SDHAF4Q5VUM1 108 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 BNIPLQ7Z465 357 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 TTC30AQ86WT1 665 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 TOP6BLQ8N6T0 577 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 MAB21L3Q8N8X9 362 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 WDR60Q8WVS4 1066 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 RORBQ92753 470 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 ZFP42Q96MM3 310 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 C1orf50Q9BV19 199 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 EBF3Q9H4W6 596 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 PNPLA3Q9NST1 481 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 PTCH2Q9Y6C5 1203 aa16.78■□□□□ 0.28
SCARB2-210ENST00000638567 GOLGA4Q13439 2230 aaKnown RBP16.77■□□□□ 0.28
SCARB2-210ENST00000638567 GNG14A0A1W2PPG7 69 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 MPP1Q00013 466 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 LSM12Q3MHD2 195 aaKnown RBP16.77■□□□□ 0.28
SCARB2-210ENST00000638567 STXBP5Q5T5C0 1151 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 MAGED4Q96JG8 741 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 FIZ1Q96SL8 496 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 TCF12Q99081 682 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 GORASP1Q9BQQ3 440 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 PIDD1Q9HB75 910 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 KCNU1A8MYU2 1149 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 F8W810 466 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 H7C4K7 107 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 MAP3K13O43283 966 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 ALDH2P05091 517 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 LINC00032P0C843 101 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 HSMCR30P0CW71 290 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 PSEN1P49768 467 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 SP2Q02086 613 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 TCEAL1Q15170 157 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 MAPK11Q15759 364 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 TMEM26Q6ZUK4 368 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 PATL1Q86TB9 770 aaKnown RBP16.77■□□□□ 0.28
SCARB2-210ENST00000638567 FAM156AQ8NDB6 213 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 OTUB1Q96FW1 271 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-210ENST00000638567 PALMDQ9NP74 551 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 KCNH4Q9UQ05 1017 aa16.77■□□□□ 0.28
SCARB2-210ENST00000638567 MGAT4DA6NG13 374 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 PCNAP12004 261 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 MSH3P20585 1137 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 AQP4P55087 323 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 GSCP56915 257 aaPredicted RBP16.77■□□□□ 0.27
SCARB2-210ENST00000638567 C1orf220Q5T0J3 134 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 C6orf52Q5T4I8 152 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 EXOC2Q96KP1 924 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 LPIN3Q9BQK8 851 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 TRIM45Q9H8W5 580 aaPredicted RBP16.77■□□□□ 0.27
SCARB2-210ENST00000638567 DERAQ9Y315 318 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 PTPRJQ12913 1337 aa16.77■□□□□ 0.27
SCARB2-210ENST00000638567 DARSP14868 501 aaKnown RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 ZYG11BQ9C0D3 744 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 RERGLQ9H628 205 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 KLQ9UEF7 1012 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 RSL24D1Q9UHA3 163 aaKnown RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 DAPK2Q9UIK4 370 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 LEF1Q9UJU2 399 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 IPPQ9Y573 584 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 C5P01031 1676 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 MSI1O43347 362 aaKnown RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 PAGE1O75459 146 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 BRCC3P46736 316 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 NDUFV1P49821 464 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 KLF1Q13351 362 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 RIBC2Q9H4K1 309 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 INVSQ9Y283 1065 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 LMO2P25791 158 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 SLC25A11Q02978 314 aaKnown RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 PWP1Q13610 501 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 DGCR6Q14129 220 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 TIGD2Q4W5G0 525 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 RHBDF2Q6PJF5 856 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 PGAM4Q8N0Y7 254 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 PPTC7Q8NI37 304 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 SPPL2AQ8TCT8 520 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 LPGAT1Q92604 370 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 OCM2P0CE71 109 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 OCMP0CE72 109 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 AKR1A1P14550 325 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 DDX5P17844 614 aaKnown RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 MAD2L1Q13257 205 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCARB2-210ENST00000638567 C11orf74Q86VG3 221 aa16.76■□□□□ 0.27
SCARB2-210ENST00000638567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-210ENST00000638567 A8MX80 341 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 LRIG2O94898 1065 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 ATG7O95352 703 aa16.75■□□□□ 0.27
SCARB2-210ENST00000638567 TTKP33981 857 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms