RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SDCCAG3Q96C92 435 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 NPAS2Q99743 824 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 PI4K2AQ9BTU6 479 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 RAB6BQ9NRW1 208 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 ARHGAP28Q9P2N2 729 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF639Q9UID6 485 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 FAM25AB3EWG3 89 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 FAM25CB3EWG5 89 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 FAM25GB3EWG6 89 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 CCRL2O00421 344 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 SLC16A4O15374 487 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 GPC4O75487 556 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 KCNK2O95069 426 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 NADKO95544 446 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 PSMA2P25787 234 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 INPP5AQ14642 412 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 UBE2UQ5VVX9 321 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 AGAP6Q5VW22 663 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 FKBP9P1Q75LS8 142 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 PODNQ7Z5L7 613 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 PTAR1Q7Z6K3 402 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 AGAP4Q96P64 663 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 IL12RB2Q99665 862 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 WDR55Q9H6Y2 383 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 RNF103-CHMP3A0A140T963 221 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 BCLAF3A2AJT9 711 aaKnown RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 WDR64B1ANS9 1081 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 H0YCG3 227 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 GRID2O43424 1007 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CCNKO75909 580 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ENDOD1O94919 500 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 AMHP03971 560 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CFHP08603 1231 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 DPEP1P16444 411 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 IL10P22301 178 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 LAMC2Q13753 1193 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CRY1Q16526 586 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 SPATS1Q496A3 300 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 NAPRTQ6XQN6 538 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 PIWIL3Q7Z3Z3 882 aaKnown RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 SPARTQ8N0X7 666 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 OR6F1Q8NGZ6 308 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF606Q8WXB4 792 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 PAK1IP1Q9NWT1 392 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CACNA2D2Q9NY47 1150 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 MOSPD1Q9UJG1 213 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 NAALAD2Q9Y3Q0 740 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 DAGLAQ9Y4D2 1042 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 COL11A2P13942 1736 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 G3V2L1 256 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 EXTL3O43909 919 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 TSPAN1O60635 241 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 LRCH4O75427 683 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 APOA4P06727 396 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 MLNP12872 115 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 TGM2P21980 687 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CLCNKBP51801 687 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 MAPK10P53779 464 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 TBCELQ5QJ74 424 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CDR2LQ86X02 465 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ERO1BQ86YB8 467 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 KCTD6Q8NC69 237 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 HDAC2Q92769 488 aaKnown RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 PGBD4Q96DM1 585 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 IL22Q9GZX6 179 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-221ENST00000638141 KIAA1257Q9ULG3 409 aa12.11□□□□□ -0.47
CAPN3-221ENST00000638141 DGKBQ9Y6T7 804 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms