RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.55
CLN6-217ENST00000636964 OLA1Q9NTK5 396 aaKnown RBP11.65□□□□□ -0.55
CLN6-217ENST00000636964 PDP2Q9P2J9 529 aa11.65□□□□□ -0.55
CLN6-217ENST00000636964 PLXNA3P51805 1871 aa11.65□□□□□ -0.55
CLN6-217ENST00000636964 GREB1Q4ZG55 1949 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 HMX2A2RU54 273 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 KRT37O76014 449 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 EFEMP2O95967 443 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 TOP3BO95985 862 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 LMNAP02545 664 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 SOD2P04179 222 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 CSE1LP55060 971 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 ITKQ08881 620 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 PRPSAP1Q14558 356 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 CDHR3Q6ZTQ4 885 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 ATXN7L3BQ96GX2 97 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 ZNF778Q96MU6 729 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 C11orf49Q9H6J7 331 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 ZNF304Q9HCX3 659 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 STX18Q9P2W9 335 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 ZFP69BQ9UJL9 534 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 CARD8Q9Y2G2 431 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 DCTN3O75935 186 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 OR6B1O95007 311 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 POLBP06746 335 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 IRF1P10914 325 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 ETFBP38117 255 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 OXCT1P55809 520 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 PLD1Q13393 1074 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 PCSK7Q16549 785 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 RGS9BPQ6ZS82 235 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 ZNF276Q8N554 614 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 FBXO27Q8NI29 283 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 C2orf15Q8WU43 125 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 PSMG2Q969U7 264 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 FAM111AQ96PZ2 611 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 GLOD4Q9HC38 313 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 NPHS2Q9NP85 383 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 CASS4Q9NQ75 786 aa11.64□□□□□ -0.55
CLN6-217ENST00000636964 NYNRINQ9P2P1 1898 aaKnown RBP11.64□□□□□ -0.55
CLN6-217ENST00000636964 ZDHHC11BP0C7U3 371 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 RHOQP17081 205 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ATP5C1P36542 298 aaKnown RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 ABCG1P45844 678 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 WDR5P61964 334 aaKnown RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 SLC10A7Q0GE19 358 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 STEAP4Q687X5 459 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 LGI2Q8N0V4 545 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 SLC39A11Q8N1S5 342 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 IL12RB2Q99665 862 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 NT5MQ9NPB1 228 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 AFF4Q9UHB7 1163 aaKnown RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 BACE2Q9Y5Z0 518 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ABHD14A-ACY1A0A1B0GW23 586 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 E2F8A0AVK6 867 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 TIMP1P01033 207 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 HMGA1P17096 107 aaKnown RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 OR1E1P30953 314 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 PDK4Q16654 411 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 SH2D5Q6ZV89 423 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 RASSF3Q86WH2 238 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 DENND1CQ8IV53 801 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 PLPP6Q8IY26 295 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 YME1L1Q96TA2 773 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 AGAP2Q99490 1192 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 BTBD10Q9BSF8 475 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 FICDQ9BVA6 458 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 DNMT3LQ9UJW3 386 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 hCG_2014768A0A024R1R8 64 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 C2orf78A6NCI8 922 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ZNF840PA6NDX5 716 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ZBBXA8MT70 800 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 PRRG1O14668 218 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 COCHO43405 550 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 RFPL1O75677 317 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ALDH1A2O94788 518 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 HTR7P34969 479 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 GMPRP36959 345 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ACVRL1P37023 503 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 ALDH1A3P47895 512 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 NRG1Q02297 640 aaPredicted RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 OVGP1Q12889 678 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 POU6F1Q14863 301 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 LGSNQ5TDP6 509 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 AFMIDQ63HM1 303 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 DUS1LQ6P1R4 473 aaKnown RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 SAMD14Q8IZD0 417 aaPredicted RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 TTC17Q96AE7 1141 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 DNAJC1Q96KC8 554 aaKnown RBP11.63□□□□□ -0.55
CLN6-217ENST00000636964 RNF38Q9H0F5 515 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 VCX3BQ9H321 246 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 LRRC40Q9H9A6 602 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 SMPD4Q9NXE4 827 aa11.63□□□□□ -0.55
CLN6-217ENST00000636964 TAS2R1Q9NYW7 299 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms