RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 A0A1W2PP55 124 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 ESPNB1AK53 854 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 ZNF500O60304 480 aaPredicted RBP16.16■□□□□ 0.18
CLN6-216ENST00000636876 SOCS5O75159 536 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 ZNF217O75362 1048 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 IGLV3-19P01714 112 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 SERPINF2P08697 491 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 DRD3P35462 400 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 CD86P42081 329 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 FNTAP49354 379 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 TPMTP51580 245 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 SKOR1P84550 965 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 SFSWAPQ12872 951 aaKnown RBP16.16■□□□□ 0.18
CLN6-216ENST00000636876 TRAF2Q12933 501 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 USP30Q70CQ3 517 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 PARS2Q7L3T8 475 aaKnown RBP16.16■□□□□ 0.18
CLN6-216ENST00000636876 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
CLN6-216ENST00000636876 LONP2Q86WA8 852 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 HDDC3Q8N4P3 179 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 ATL2Q8NHH9 583 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 GANCQ8TET4 914 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 TADA1Q96BN2 335 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 FCRL5Q96RD9 977 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 RBM15Q96T37 977 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLN6-216ENST00000636876 HDAC8Q9BY41 377 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 CD93Q9NPY3 652 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 DYRK4Q9NR20 520 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 FBXL12Q9NXK8 326 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 SERGEFQ9UGK8 458 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 RSPH14Q9UHP6 348 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 CDC23Q9UJX2 597 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 PCDHGC4Q9Y5F7 938 aa16.16■□□□□ 0.18
CLN6-216ENST00000636876 TSPAN11A1L157 253 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 PLK4O00444 970 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 TRAFD1O14545 582 aaPredicted RBP16.15■□□□□ 0.18
CLN6-216ENST00000636876 HTRA2O43464 458 aaPredicted RBP16.15■□□□□ 0.18
CLN6-216ENST00000636876 IFNB1P01574 187 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 P2RY2P41231 377 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 LMNB2Q03252 620 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 CNTN1Q12860 1018 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 TUBB2AQ13885 445 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 SLC14A2Q15849 920 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 P3H1Q32P28 736 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 MAP7D1Q3KQU3 841 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 USP39Q53GS9 565 aaKnown RBP16.15■□□□□ 0.18
CLN6-216ENST00000636876 CCDC137Q6PK04 289 aaKnown RBP16.15■□□□□ 0.18
CLN6-216ENST00000636876 ARHGEF18Q6ZSZ5 1173 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 ERN2Q76MJ5 926 aaKnown RBP16.15■□□□□ 0.18
CLN6-216ENST00000636876 GSTA5Q7RTV2 222 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 KBTBD6Q86V97 674 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 CCDC89Q8N998 374 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 SPATA22Q8NHS9 363 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 HCAR2Q8TDS4 363 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 FAM131CQ96AQ9 280 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 ECHDC3Q96DC8 303 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 PRRX2Q99811 253 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 OMDQ99983 421 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 TUBB2BQ9BVA1 445 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 ZSCAN32Q9NX65 697 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 FZD4Q9ULV1 537 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 CYP8B1Q9UNU6 501 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 NCKAP1Q9Y2A7 1128 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 RAI2Q9Y5P3 530 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 USP34Q70CQ2 3546 aa16.15■□□□□ 0.18
CLN6-216ENST00000636876 FAM186AA6NE01 2351 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 C16orf96A6NNT2 1141 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 F5H423 210 aaPredicted RBP16.14■□□□□ 0.17
CLN6-216ENST00000636876 CCDC188H7C350 402 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 RNASEH2AO75792 299 aaKnown RBP16.14■□□□□ 0.17
CLN6-216ENST00000636876 CA4P22748 312 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 PSMB4P28070 264 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 NEK3P51956 506 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 TCF15Q12870 199 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 NUMA1Q14980 2115 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 CFAP58Q5T655 872 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 AGBL4Q5VU57 503 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 BRAT1Q6PJG6 821 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 ZSWIM9Q86XI8 627 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 GLIS1Q8NBF1 620 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 RLN3Q8WXF3 142 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 OXNAD1Q96HP4 312 aaPredicted RBP16.14■□□□□ 0.17
CLN6-216ENST00000636876 DDX47Q9H0S4 455 aaKnown RBP16.14■□□□□ 0.17
CLN6-216ENST00000636876 NEUROG2Q9H2A3 272 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 FAM153AQ9UHL3 310 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 EML5Q05BV3 1969 aa16.14■□□□□ 0.17
CLN6-216ENST00000636876 RIF1Q5UIP0 2472 aaKnown RBP16.13■□□□□ 0.17
CLN6-216ENST00000636876 PLXND1Q9Y4D7 1925 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 IGHV1OR15-9A0A0B4J2B8 117 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 A0A1W2PQ67 120 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 SLC7A4O43246 635 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 ANXA9O76027 345 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 PGLSO95336 258 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 MT-CYBP00156 380 aaPredicted RBP16.13■□□□□ 0.17
CLN6-216ENST00000636876 CPP00450 1065 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 ZSCAN5DPP0CG00 497 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 ETS1P14921 441 aa16.13■□□□□ 0.17
CLN6-216ENST00000636876 TIMP2P16035 220 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms