RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 RASSF1Q9NS23 344 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 CROTQ9UKG9 612 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 EIF3HO15372 352 aaKnown RBP eCLIP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 LGALS2P05162 132 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 AHCYP23526 432 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 DGKAP23743 735 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 RYKP34925 604 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 ARHGDIBP52566 201 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 GRTP1Q5TC63 336 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 LPCAT2Q7L5N7 544 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 TMPRSS11BQ86T26 416 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 PHYKPLQ8IUZ5 450 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 SH3BGRL2Q9UJC5 107 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 FBXW2Q9UKT8 454 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 ZCCHC11Q5TAX3 1644 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 FBXO33Q7Z6M2 555 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 KRT73Q86Y46 540 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 NOA1Q8NC60 698 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 FATE1Q969F0 183 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 CEP295NLQ96MC4 621 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 CDC42EP4Q9H3Q1 356 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 LYNP07948 512 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CPSF6Q16630 551 aaKnown RBP eCLIP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CIR1Q86X95 450 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 HID1Q8IV36 788 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF433Q8N7K0 673 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF366Q8N895 744 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 PJA1Q8NG27 643 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ELOVL4Q9GZR5 314 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ATP13A3Q9H7F0 1226 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 WASF2Q9Y6W5 498 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CCT8L1PA6NM43 557 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 MSI1O43347 362 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 FAM228BP0C875 321 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CCDC166P0CW27 439 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 EFNA1P20827 205 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 MAGP20916 626 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CDH3P22223 829 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 MRPS6P82932 125 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 SBK1Q52WX2 424 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 GALNT5Q7Z7M9 940 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ATCAYQ86WG3 371 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 FNDC11Q9BVV2 318 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 NFASCO94856 1347 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 VIPP01282 170 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CDH17Q12864 832 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 PSMD5Q16401 504 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 KAT5Q92993 513 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 LMAN2LQ9H0V9 348 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 REEP1Q9H902 201 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 NMRAL1Q9HBL8 299 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC27A6Q9Y2P4 619 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 TRAPPC6AO75865 159 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CHRNGP07510 517 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 TIE1P35590 1138 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ERVK-21P61565 698 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CCNI2Q6ZMN8 369 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CD302Q8IX05 232 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 OFCC1Q8IZS5 231 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC5A5Q92911 643 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 ADH1AP07327 375 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 STARP49675 285 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 CXCR3P49682 368 aa17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 BHLHE22Q8NFJ8 381 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-227ENST00000636549 RBL1P28749 1068 aa17.96■□□□□ 0.46
CACNA1A-227ENST00000636549 BRCC3P46736 316 aa17.96■□□□□ 0.46
CACNA1A-227ENST00000636549 ZFPM1Q8IX07 1006 aa17.96■□□□□ 0.46
CACNA1A-227ENST00000636549 NPEPPSL1A6NEC2 478 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 BTN3A3O00478 584 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 SIN3BO75182 1162 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 GLUD1P00367 558 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 ZNF806P0C7X5 589 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 LRPAP1P30533 357 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 IL12RB1P42701 662 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 NR0B1P51843 470 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 CPA6Q8N4T0 437 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 OR52K2Q8NGK3 314 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 BRSK1Q8TDC3 778 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 TCF7L2Q9NQB0 619 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 ABCC13Q9NSE7 274 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 ATAD3AQ9NVI7 634 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 B4DGG1 531 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 CD44P16070 742 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 DGKEP52429 567 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 ARMC3Q5W041 872 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 GALNT7Q86SF2 657 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 C12orf29Q8N999 325 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 TCF25Q9BQ70 676 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 TAGLN3Q9UI15 199 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 A0A1B0GTH6 734 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 DCXO43602 365 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 FXR2P51116 673 aaKnown RBP eCLIP17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 PUS10Q3MIT2 529 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 KLHL5Q96PQ7 755 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 ARHGEF40Q8TER5 1519 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 FCER2P06734 321 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 OR1D2P34982 312 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 LGALS3BPQ08380 585 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms