RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 OR7D4Q8NG98 312 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 ZNF564Q8TBZ8 553 aaPredicted RBP15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 GCN1Q92616 2671 aaKnown RBP15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 ARHGEF26Q96DR7 871 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 DEPDC7Q96QD5 511 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 PACSIN1Q9BY11 444 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 SLC17A9Q9BYT1 436 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 NLGN3Q9NZ94 848 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 IMPACTQ9P2X3 320 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 OR12D3Q9UGF7 316 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 IP6K2Q9UHH9 426 aa15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 IPO11Q9UI26 975 aaKnown RBP15.81■□□□□ 0.12
SNRNP48-203ENST00000634363 IGLV3-10A0A075B6K4 115 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 CPED1A4D0V7 1026 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 POM121BA6NF01 834 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 A6NNZ2 444 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 MYO1FO00160 1098 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 TMEM253P0C7T8 217 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 CYLC1P35663 651 aaPredicted RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 DUSP3P51452 185 aaPredicted RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 PCBP4P57723 403 aaKnown RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 NRG1Q02297 640 aaPredicted RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 PIGHQ14442 188 aaPredicted RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 ARHGAP40Q5TG30 622 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 C22orf39Q6P5X5 142 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 DPY19L3Q6ZPD9 716 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 SETD3Q86TU7 594 aaPredicted RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 CCDC170Q8IYT3 715 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 ZNF683Q8IZ20 524 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 ZNF843Q8N446 348 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 LSM14AQ8ND56 463 aaKnown RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 MAPK15Q8TD08 544 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 PPP1R16AQ96I34 528 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 FEM1CQ96JP0 617 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 BMFQ96LC9 184 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 ZNF578Q96N58 590 aaPredicted RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 HDAC8Q9BY41 377 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 ZYG11BQ9C0D3 744 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 CPNE5Q9HCH3 593 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 LUC7LQ9NQ29 371 aaKnown RBP15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 UVRAGQ9P2Y5 699 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 HS3ST3A1Q9Y663 406 aa15.8■□□□□ 0.12
SNRNP48-203ENST00000634363 PTPRQQ9UMZ3 2332 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 DRGXA6NNA5 263 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 K7ESM1 405 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 SCAMP1O15126 338 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 IPO7O95373 1038 aaKnown RBP15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 CLCN6P51797 869 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 NEK3P51956 506 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 HNRNPKP61978 463 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 RPS21P63220 83 aaKnown RBP15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 CFHR1Q03591 330 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 SPA17Q15506 151 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 CDKN3Q16667 212 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 CDCP2Q5VXM1 449 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 ABI3BPQ7Z7G0 1075 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 DCP2Q8IU60 420 aaKnown RBP15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 TMTC1Q8IUR5 882 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 LSMEM2Q8N112 164 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 DCAF4L2Q8NA75 395 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 IFI44Q8TCB0 444 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 TBC1D31Q96DN5 1066 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 EPAS1Q99814 870 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 DUSP23Q9BVJ7 150 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 EVA1BQ9NVM1 165 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 PPARGC1AQ9UBK2 798 aaKnown RBP15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 PCSK1NQ9UHG2 260 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 FZD10Q9ULW2 581 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 AP4E1Q9UPM8 1137 aa15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 SMG1Q96Q15 3661 aaKnown RBP15.79■□□□□ 0.12
SNRNP48-203ENST00000634363 DOCK4Q8N1I0 1966 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 RAD51BO15315 384 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 KLK10O43240 276 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 CREB3O43889 395 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 LRCH4O75427 683 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 LRIG2O94898 1065 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 ADRB3P13945 408 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 PLA2G2AP14555 144 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 MIPP30301 263 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 L1CAMP32004 1257 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 PCK1P35558 622 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 LSSP48449 732 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 TMPRSS3P57727 454 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 SGCGQ13326 291 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 FGL2Q14314 439 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 FZD2Q14332 565 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 TMEM259Q4ZIN3 620 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 MANEALQ5VSG8 457 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 RETSATQ6NUM9 610 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 RYBPQ8N488 228 aaPredicted RBP15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 NIPA2Q8N8Q9 360 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 FAM174AQ8TBP5 190 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 IFT43Q96FT9 208 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 BTBD6Q96KE9 485 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 HEPHQ9BQS7 1158 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 POLR1BQ9H9Y6 1135 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 ATP13A1Q9HD20 1204 aa15.78■□□□□ 0.12
SNRNP48-203ENST00000634363 INTUQ9ULD6 942 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms