RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 HERC3Q15034 1050 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 MAPRE2Q15555 327 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 EZH2Q15910 746 aaKnown RBP4.95□□□□□ -1.62
SDCBP-213ENST00000630925 SGCBQ16585 318 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 PLA1AQ53H76 456 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 JADE1Q6IE81 842 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 DPY19L2P1Q6NXN4 242 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 PSRC1Q6PGN9 363 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-213ENST00000630925 NCCRP1Q6ZVX7 275 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-213ENST00000630925 SLC51AQ86UW1 340 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 C12orf40Q86WS4 652 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 SMYD1Q8NB12 490 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 NHLRC2Q8NBF2 726 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 RCBTB1Q8NDN9 531 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 AGBL3Q8NEM8 1001 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 OR14C36Q8NHC7 312 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 PSMA8Q8TAA3 256 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 STARD8Q92502 1023 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 KIFAP3Q92845 792 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 ELP4Q96EB1 424 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 INTS4Q96HW7 963 aaKnown RBP4.95□□□□□ -1.62
SDCBP-213ENST00000630925 SLC41A2Q96JW4 573 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF350Q9GZX5 532 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 TMEM117Q9H0C3 514 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 HIPK3Q9H422 1215 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 LRRC19Q9H756 370 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 FAM120CQ9NX05 1096 aaKnown RBP4.95□□□□□ -1.62
SDCBP-213ENST00000630925 HMGXB4Q9UGU5 601 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 DDX19BQ9UMR2 479 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 ERVK-19Q9WJR5 959 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 ADAM18Q9Y3Q7 739 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 PCDHA1Q9Y5I3 950 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 NUP188Q5SRE5 1749 aa4.95□□□□□ -1.62
SDCBP-213ENST00000630925 DHX29Q7Z478 1369 aaKnown RBP4.95□□□□□ -1.62
SDCBP-213ENST00000630925 A0A1B0GTQ1 180 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF185O15231 689 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 SPRY1O43609 319 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 NTSR2O95665 410 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PCCBP05166 539 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 FHP07954 510 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 CCDC192P0DO97 292 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 TIMP2P16035 220 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ERCC2P18074 760 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 KRT15P19012 456 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 CDH2P19022 906 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 TNFRSF1AP19438 455 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 SESN2P58004 480 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ACTR3P61158 418 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 YBX1P67809 324 aaKnown RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 GUCY1B3Q02153 619 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 GFPT1Q06210 699 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 TNK2Q07912 1038 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PPP3CAQ08209 521 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ABRQ12979 859 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 RRS1Q15050 365 aaKnown RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 EPHA7Q15375 998 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 GPR162Q16538 588 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 EFHC2Q5JST6 749 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF484Q5JVG2 852 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 C15orf39Q6ZRI6 1047 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 TMPRSS7Q7RTY8 843 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 BIVMQ86UB2 503 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 WDR5BQ86VZ2 330 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 FAM129CQ86XR2 697 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ENDOVQ8N8Q3 282 aaKnown RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 SETD9Q8NE22 299 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 BBS1Q8NFJ9 593 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 DBF4BQ8NFT6 615 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 ZCCHC10Q8TBK6 192 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PHOSPHO2Q8TCD6 241 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 DLG3Q92796 817 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 AZIN2Q96A70 460 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PTERQ96BW5 349 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PRR11Q96HE9 360 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 VRK1Q99986 396 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 DPH2Q9BQC3 489 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 LPIN3Q9BQK8 851 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 CORO1BQ9BR76 489 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 TPPP3Q9BW30 176 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 IMPG2Q9BZV3 1241 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 POFUT1Q9H488 388 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PGPEP1Q9NXJ5 209 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 DNAJB11Q9UBS4 358 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 TRPS1Q9UHF7 1281 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 CFL2Q9Y281 166 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 FCF1Q9Y324 198 aaKnown RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 SNX14Q9Y5W7 946 aa4.94□□□□□ -1.62
SDCBP-213ENST00000630925 COL22A1Q8NFW1 1626 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-213ENST00000630925 PRXQ9BXM0 1461 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FAM237BA0A1B0GVD1 139 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FAM230AA0A1W2PPH8 454 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 A0A1W2PPW3 197 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 OR5K4A6NMS3 321 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 POLRMTO00411 1230 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NDUFAB1O14561 156 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 LCE2BO14633 110 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ADAMDEC1O15204 470 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms