RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CDYL2Q8N8U2 506 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 PWWP2AQ96N64 755 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 REXO4Q9GZR2 422 aaKnown RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 RSPH9Q9H1X1 276 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ZNF232Q9UNY5 417 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ZMPSTE24O75844 475 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 UQCRBP14927 111 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 SP100P23497 879 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 GRIA3P42263 894 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CTBP1Q13363 440 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ATP1A4Q13733 1029 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CNSTQ6PJW8 725 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 KRT77Q7Z794 578 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 C8orf59Q8N0T1 100 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 SPATA6LQ8N4H0 392 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ACMSDQ8TDX5 336 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 MFSD14AQ96MC6 490 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 PAIP1Q9H074 479 aaKnown RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 DDX18Q9NVP1 670 aaKnown RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 AKAP7Q9P0M2 348 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 MSRAQ9UJ68 235 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 LEF1Q9UJU2 399 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 COG5Q9UP83 839 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 C15orf41Q9Y2V0 281 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 RIC1Q4ADV7 1423 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 TLR5O60602 858 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ITGA1P56199 1179 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 NAA20P61599 178 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 PTSQ03393 145 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 TRAF3Q13114 568 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ECM1Q16610 540 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 DGUOKQ16854 277 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 LLGL2Q6P1M3 1020 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 DNAJB14Q8TBM8 379 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 MAGEE2Q8TD90 523 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ZNF184Q99676 751 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CYLDQ9NQC7 956 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CNGB3Q9NQW8 809 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 SESN1Q9Y6P5 492 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 BAZ2BQ9UIF8 2168 aaKnown RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 A0A087WXM4 84 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 TGFB1I1O43294 461 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 PIAS1O75925 651 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 PSMD7P51665 324 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CDK18Q07002 472 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ABRQ12979 859 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 XKR6Q5GH73 641 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ACE2Q9BYF1 805 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-209ENST00000627620 ARHGEF3Q9NR81 526 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 FAM105AQ9NUU6 356 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 CHKBQ9Y259 395 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 LYVE1Q9Y5Y7 322 aa12.9□□□□□ -0.34
SCN8A-209ENST00000627620 NDUFS2O75306 463 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 BRCC3P46736 316 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 IDH2P48735 452 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 TAF5Q15542 800 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 TREML2Q5T2D2 321 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 FOXR1Q6PIV2 292 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 GCNT7Q6ZNI0 430 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 GPRIN3Q6ZVF9 776 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ARCQ7LC44 396 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 CAMK1DQ8IU85 385 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ZFP28Q8NHY6 868 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 QSOX1O00391 747 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ARF4P18085 180 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 PSME3P61289 254 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 TOMM20Q15388 145 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 MAPK11Q15759 364 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 DUPD1Q68J44 220 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 SCIMPQ6UWF3 145 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 APTXQ7Z2E3 356 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 CYP4X1Q8N118 509 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 NETO2Q8NC67 525 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 OR52K2Q8NGK3 314 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 MOSPD2Q8NHP6 518 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 DGCR6LQ9BY27 220 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 SLC28A1O00337 649 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 PAPSS1O43252 624 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 AVILO75366 819 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 OR6B1O95007 311 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 HLA-DQA2P01906 255 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 HNF4AP41235 474 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 TARBP2Q15633 366 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 RGMBQ6NW40 437 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 IRF2BP2Q7Z5L9 587 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms