RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 KIF9Q9HAQ2 790 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 PIDD1Q9HB75 910 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 ARNT2Q9HBZ2 717 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 PPANQ9NQ55 473 aaKnown RBP10.45□□□□□ -0.74
ATRX-216ENST00000624403 CHRAC1Q9NRG0 131 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 TDP1Q9NUW8 608 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 HAUS2Q9NVX0 235 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 SENP1Q9P0U3 644 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 MAP10Q9P2G4 905 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 SLC17A6Q9P2U8 582 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 VPS28Q9UK41 221 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 FAM169AQ9Y6X4 670 aa10.45□□□□□ -0.74
ATRX-216ENST00000624403 MTCL1Q9Y4B5 1905 aaKnown RBP10.45□□□□□ -0.74
ATRX-216ENST00000624403 LOC285095A0A1B0GVY8 99 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 CCDC78A2IDD5 438 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 TRIM49D1C9J1S8 452 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 SPAG7O75391 227 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 TMCC1O94876 653 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 CD160O95971 181 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MT-ND3P03897 115 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 CYBBP04839 570 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 ATXN1LP0C7T5 689 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 LSP1P33241 339 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 USP4Q13107 963 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 POU6F1Q14863 301 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 SLC1A5Q15758 541 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 SMAD1Q15797 465 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 ZNF77Q15935 545 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 TUSC1Q2TAM9 212 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 SIRPB2Q5JXA9 342 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 FYB2Q5VWT5 728 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 APCDD1Q8J025 514 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 ANKRD42Q8N9B4 389 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 DCAF4L2Q8NA75 395 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 FIBINQ8TAL6 211 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 ITFG1Q8TB96 612 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MGARPQ8TDB4 240 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 ATXN2LQ8WWM7 1075 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 CDKL2Q92772 493 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 CENPTQ96BT3 561 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MFSD3Q96ES6 412 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 FEM1CQ96JP0 617 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 SERAC1Q96JX3 654 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 NSMCE3Q96MG7 304 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 SMC6Q96SB8 1091 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 GDF15Q99988 308 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 NOD2Q9HC29 1040 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MRM3Q9HC36 420 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 INTS9Q9NV88 658 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 PLK2Q9NYY3 685 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 IL1RAPL1Q9NZN1 696 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 VPS51Q9UID3 782 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 CLEC4EQ9ULY5 219 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MRPS23Q9Y3D9 190 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 TCAF1Q9Y4C2 921 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MYO18AQ92614 2054 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 DENND4CQ5VZ89 1909 aa10.44□□□□□ -0.74
ATRX-216ENST00000624403 MKI67P46013 3256 aaKnown RBP10.44□□□□□ -0.74
ATRX-216ENST00000624403 RFXAPO00287 272 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 INSIG1O15503 277 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 PRPF4O43172 522 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATRX-216ENST00000624403 KRT37O76014 449 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 PAPLNO95428 1278 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SERPINF2P08697 491 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SNRPAP09012 282 aaKnown RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 TCF3P15923 654 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 KRT4P19013 534 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 CR2P20023 1033 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 ADRA1DP25100 572 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 CD70P32970 193 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 SERPINB9P50453 376 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SERPINH1P50454 418 aaKnown RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 CDK18Q07002 472 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 LMAN2Q12907 356 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 MSLNQ13421 630 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 BMPR2Q13873 1038 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 KCNC3Q14003 757 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SEPT6Q14141 434 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 SLC14A2Q15849 920 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 LGSNQ5TDP6 509 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 TMC5Q6UXY8 1006 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 PACS1Q6VY07 963 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 TMEM25Q86YD3 366 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 RNF135Q8IUD6 432 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 ZNF511Q8NB15 262 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 IFT43Q96FT9 208 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 EXOC2Q96KP1 924 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 LMLNQ96KR4 655 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 ZNF778Q96MU6 729 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 NUDCD1Q96RS6 583 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 RANBP9Q96S59 729 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 KLF6Q99612 283 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SFXN1Q9H9B4 322 aa10.43□□□□□ -0.74
ATRX-216ENST00000624403 SSU72Q9NP77 194 aaKnown RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 C20orf96Q9NUD7 363 aaPredicted RBP10.43□□□□□ -0.74
ATRX-216ENST00000624403 NKIRAS1Q9NYS0 192 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms