RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CCDC92Q53HC0 331 aaPredicted RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 KCTD8Q6ZWB6 473 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ZBTB46Q86UZ6 589 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SLC15A3Q8IY34 581 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 TTC39CQ8N584 583 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 TXNDC5Q8NBS9 432 aaKnown RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 CYGBQ8WWM9 190 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ACDQ96AP0 544 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NXNL1Q96CM4 212 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ITPKCQ96DU7 683 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ZBED3Q96IU2 234 aaPredicted RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 GPR78Q96P69 363 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 LPIN3Q9BQK8 851 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NCKIPSDQ9NZQ3 722 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 BRCA1P38398 1863 aaKnown RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 CCDC78A2IDD5 438 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 GAS2O43903 313 aaKnown RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 NRP2O60462 931 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 PGK1P00558 417 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 LCP1P13796 627 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ZNF182P17025 639 aaPredicted RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 PTPN3P26045 913 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NMBRP28336 390 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 RBP5P82980 135 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NME3Q13232 169 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SLC10A6Q3KNW5 377 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 EGFLAMQ63HQ2 1017 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 TMEM53Q6P2H8 277 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 PIWIL4Q7Z3Z4 852 aaKnown RBP14.24□□□□□ -0.13
LDB3-209ENST00000623056 OFCC1Q8IZS5 231 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SLC15A4Q8N697 577 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 MTMR14Q8NCE2 650 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SHCBP1Q8NEM2 672 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NLGN2Q8NFZ4 835 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 FAM167AQ96KS9 214 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 SLC25A23Q9BV35 468 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 CCDC68Q9H2F9 335 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ADAMTS10Q9H324 1103 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ASB7Q9H672 318 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 ACOT9Q9Y305 439 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 TRIM17Q9Y577 477 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
LDB3-209ENST00000623056 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 CLOCKO15516 846 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 ESRRBO95718 433 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 GRM5P41594 1212 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 C1QTNF8P60827 252 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 TNK2Q07912 1038 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 TRAF2Q12933 501 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 NFATC3Q12968 1075 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 NEDD8Q15843 81 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 RGS21Q2M5E4 152 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 KCTD11Q693B1 232 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 ABRAXAS1Q6UWZ7 409 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 HACD2Q6Y1H2 254 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 STRADAQ7RTN6 431 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 OR9I1Q8NGQ6 314 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 TRAPPC12Q8WVT3 735 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 SEPT8Q92599 483 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 SGIP1Q9BQI5 828 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 POMKQ9H5K3 350 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 TNFRSF12AQ9NP84 129 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 AGPAT4Q9NRZ5 378 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 MRGBPQ9NV56 204 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 DPP3Q9NY33 737 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 ITGB1BP2Q9UKP3 347 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 ADAMTS5Q9UNA0 930 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 MAGEB16A2A368 324 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 TPST1O60507 370 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 E2F6O75461 281 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 CYP2B6P20813 491 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 ATP6AP1Q15904 470 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 MAP7D1Q3KQU3 841 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 FAM117BQ6P1L5 589 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 CEP97Q8IW35 865 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 ZC3H7AQ8IWR0 971 aaKnown RBP14.23□□□□□ -0.13
LDB3-209ENST00000623056 TRUB1Q8WWH5 349 aaKnown RBP14.23□□□□□ -0.13
LDB3-209ENST00000623056 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 MLPHQ9BV36 600 aaPredicted RBP14.23□□□□□ -0.13
LDB3-209ENST00000623056 MEAF6Q9HAF1 191 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 SETD4Q9NVD3 440 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 GID8Q9NWU2 228 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.23□□□□□ -0.13
LDB3-209ENST00000623056 TMEM9Q9P0T7 183 aa14.23□□□□□ -0.13
LDB3-209ENST00000623056 PHIPQ8WWQ0 1821 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 DHRS12A0PJE2 317 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 NEMP2A6NFY4 417 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 CFAP99D6REC4 459 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 ZBTB24O43167 697 aaPredicted RBP14.22□□□□□ -0.13
LDB3-209ENST00000623056 NOL3O60936 208 aaKnown RBP14.22□□□□□ -0.13
LDB3-209ENST00000623056 AHSGP02765 367 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 GMPSP49915 693 aaPredicted RBP14.22□□□□□ -0.13
LDB3-209ENST00000623056 MAPK10P53779 464 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 BACE1P56817 501 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 MPP1Q00013 466 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 GNA12Q03113 381 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms