RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 UGT2A3Q6UWM9 527 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SCD5Q86SK9 330 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 LRRTM3Q86VH5 581 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 THEM5Q8N1Q8 247 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 AFAP1L2Q8N4X5 818 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 ICA1LQ8NDH6 482 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 GABPB2Q8TAK5 448 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 HEXDCQ8WVB3 486 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 TSPAN17Q96FV3 270 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF419Q96HQ0 510 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SUSD3Q96L08 255 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 FCRL2Q96LA5 508 aaPredicted RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 C1orf74Q96LT6 269 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SH3GL3Q99963 347 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 DDX50Q9BQ39 737 aaKnown RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 CENPKQ9BS16 269 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SIK2Q9H0K1 926 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRPV6Q9H1D0 765 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF408Q9H9D4 720 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 WDR41Q9HAD4 459 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 PIDD1Q9HB75 910 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 MRPL40Q9NQ50 206 aaKnown RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 PAPOLBQ9NRJ5 636 aaKnown RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 NCKIPSDQ9NZQ3 722 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 NDUFA13Q9P0J0 144 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC2A6Q9UGQ3 507 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 RIMS3Q9UJD0 308 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 SARDHQ9UL12 918 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 RAB26Q9ULW5 256 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 INPP5FQ9Y2H2 1132 aa9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 COPG1Q9Y678 874 aaKnown RBP9.71□□□□□ -0.86
IGHV3-54-201ENST00000622166 MIA3Q5JRA6 1907 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CCDC78A2IDD5 438 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 HEATR9A2RTY3 570 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 E9PAM4 449 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 ACOT8O14734 319 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 INPPL1O15357 1258 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 DUSP11O75319 330 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 PEX11BO96011 259 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 PENKP01210 267 aaPredicted RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 JUNP05412 331 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 RBP1P09455 135 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 LTA4HP09960 611 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 PABPC4LP0CB38 370 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CPB1P15086 417 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC26A3P40879 764 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 RGS2P41220 211 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 BRCC3P46736 316 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 ATP4BP51164 291 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CHN2P52757 468 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 NDST2P52849 883 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 SLC12A2P55011 1212 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 MLLT6P55198 1093 aaPredicted RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 WNT3AP56704 352 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 NKX3-2P78367 333 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 MS4A2Q01362 244 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 FOLH1Q04609 750 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 SULT2A1Q06520 285 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 TUSC3Q13454 348 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 ART3Q13508 389 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 FLOT2Q14254 428 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 SQLEQ14534 574 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 MAPRE2Q15555 327 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CNGA3Q16281 694 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 FAM83EQ2M2I3 478 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 MMEL1Q495T6 779 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 AGAP9Q5VTM2 703 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 NXNQ6DKJ4 435 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 OVOS1Q6IE37 1185 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 TRIM67Q6ZTA4 783 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 C14orf80Q86SX3 495 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 SERINC5Q86VE9 423 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 ZNF683Q8IZ20 524 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 UMODL1-AS1Q8N2C9 162 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CCNYL1Q8N7R7 359 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 HIPK4Q8NE63 616 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 OR10T2Q8NGX3 314 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 AGR3Q8TD06 166 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 RSPH1Q8WYR4 309 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CASP10Q92851 521 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 TOP1MTQ969P6 601 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 TADA1Q96BN2 335 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 MOCOSQ96EN8 888 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 IMP4Q96G21 291 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 DUS3LQ96G46 650 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 DCUN1D1Q96GG9 259 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 OMDQ99983 421 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 PAAF1Q9BRP4 392 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 FTHL17Q9BXU8 183 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 UPF3AQ9H1J1 476 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 Q9H521 79 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 POMKQ9H5K3 350 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 NOL6Q9H6R4 1146 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 MEAF6Q9HAF1 191 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 EML4Q9HC35 981 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 PLK2Q9NYY3 685 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 CNOT11Q9UKZ1 510 aaKnown RBP9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
IGHV3-54-201ENST00000622166 G3BP2Q9UN86 482 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms