RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CSNK1DP48730 415 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 VPS41P49754 854 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 TPMTP51580 245 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 GDPD4Q6W3E5 623 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 PDCD6IPQ8WUM4 868 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 CPEB1Q9BZB8 566 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 SLC25A51Q9H1U9 297 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 GBA3Q9H227 469 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 AMACRQ9UHK6 382 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 RSPH14Q9UHP6 348 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 GGT7Q9UJ14 662 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 CYP8B1Q9UNU6 501 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 CHKBQ9Y259 395 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 NEU2Q9Y3R4 380 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 ALOX15BO15296 676 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 PMPCBO75439 489 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 GCATO75600 419 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 PRLP01236 227 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 AP1S1P61966 158 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 PCSK7Q16549 785 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 TMIEQ8NEW7 156 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 TADA1Q96BN2 335 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 KRT12Q99456 494 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 PABPC3Q9H361 631 aaKnown RBP13.77□□□□□ -0.21
NEK3-210ENST00000620675 SUV39H2Q9H5I1 410 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 FBXL12Q9NXK8 326 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 ITM2BQ9Y287 266 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
NEK3-210ENST00000620675 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 SPINT1O43278 529 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 PRNPP04156 253 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 C7P10643 843 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 P2RY2P41231 377 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 PTGIRP43119 386 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 TAS2R38P59533 333 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 SPARCL1Q14515 664 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 PIP5KL1Q5T9C9 394 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 GSTA5Q7RTV2 222 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 HDDC3Q8N4P3 179 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 CAMKK1Q8N5S9 505 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 LRRN4CLQ8ND94 238 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 VAT1Q99536 393 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 ATP13A3Q9H7F0 1226 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 PCDHB9Q9Y5E1 797 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 SCN8AQ9UQD0 1980 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 PLXNA2O75051 1894 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 GOLGA6L10A0A0M3HER8 536 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 CFAP69A5D8W1 941 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 AXIN1O15169 862 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 HTRA2O43464 458 aaPredicted RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 OPHN1O60890 802 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 RNASEH1O60930 286 aaKnown RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 DNTTP04053 509 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 TUBB4AP04350 444 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 STIP1P31948 543 aaKnown RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 ACSL1P33121 698 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 ABL2P42684 1182 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 MAP7D1Q3KQU3 841 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 ZNF805Q5CZA5 627 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 AGBL4Q5VU57 503 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 KDELC1Q6UW63 502 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 ARHGEF18Q6ZSZ5 1173 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 ECHDC3Q96DC8 303 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 FCRL5Q96RD9 977 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 TDRD1Q9BXT4 1180 aaKnown RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 ITM2CQ9NQX7 267 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 USP36Q9P275 1121 aaKnown RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 RNF14Q9UBS8 474 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 MBD1Q9UIS9 605 aaPredicted RBP13.76□□□□□ -0.21
NEK3-210ENST00000620675 TRHDEQ9UKU6 1024 aa13.76□□□□□ -0.21
NEK3-210ENST00000620675 TNRC6BQ9UPQ9 1833 aaKnown RBP13.75□□□□□ -0.21
NEK3-210ENST00000620675 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
NEK3-210ENST00000620675 FZD6O60353 706 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 USP12O75317 370 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 ALDH1A2O94788 518 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 ADH1BP00325 375 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 SERPINF2P08697 491 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 SP9P0CG40 484 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 TIMP2P16035 220 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 C5AR1P21730 350 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 BCKDHBP21953 392 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 ITGB7P26010 798 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 CHRNA4P43681 627 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 FNTAP49354 379 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 RAD51Q06609 339 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 GALNT3Q14435 633 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 P3H1Q32P28 736 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
NEK3-210ENST00000620675 GANCQ8TET4 914 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms