RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ALOX15BO15296 676 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 EIF3HO15372 352 aaKnown RBP eCLIP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PPFIA2O75334 1257 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 GJB3O75712 270 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 IGSF6O95976 241 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 AGTP01019 485 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 EGFP01133 1207 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 MYBL2P10244 700 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 GRIA1P42261 906 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 KIR2DL1P43626 348 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 RECQLP46063 649 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 NPY2RP49146 381 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 ARL4CP56559 192 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 AP1S1P61966 158 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PRKCQQ04759 706 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 CDK18Q07002 472 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 ENPP2Q13822 863 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 GRM3Q14832 879 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PON2Q15165 354 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 HNRNPA1L2Q32P51 320 aaKnown RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 FNDC3BQ53EP0 1204 aaKnown RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 FNBP1LQ5T0N5 605 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 SYCP2LQ5T4T6 812 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 C9orf64Q5T6V5 341 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 NAPEPLDQ6IQ20 393 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 DENND5AQ6IQ26 1287 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 C22orf39Q6P5X5 142 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 DPY19L3Q6ZPD9 716 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PDIK1LQ8N165 341 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 RYBPQ8N488 228 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 IPMKQ8NFU5 416 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 OR2A12Q8NGT7 310 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 HNRNPLLQ8WVV9 542 aaKnown RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PTPRN2Q92932 1015 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 VOPP1Q96AW1 172 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 FEM1CQ96JP0 617 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 GDAP1L1Q96MZ0 367 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PWWP2AQ96N64 755 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 FMO2Q99518 471 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 HEPHQ9BQS7 1158 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 TM6SF2Q9BZW4 377 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 ARNT2Q9HBZ2 717 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 XAB2Q9HCS7 855 aaKnown RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 CASS4Q9NQ75 786 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 EVLQ9UI08 416 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-209ENST00000620393 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 RAI2Q9Y5P3 530 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 STON1Q9Y6Q2 735 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 DOCK4Q8N1I0 1966 aa8.11□□□□□ -1.11
CPNE3-209ENST00000620393 EDDM13A0A1B0GTR0 161 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SDR42E2A6NKP2 422 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 E7ESA3 106 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 TRAFD1O14545 582 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 HTRA2O43464 458 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 BNIP3LO60238 219 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 FZD6O60353 706 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 USP12O75317 370 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 AVILO75366 819 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ERLIN1O75477 346 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 NDST3O95803 873 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 PRLP01236 227 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 FAM153BP0C7A2 387 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 H2AFXP16104 143 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 GKP32189 559 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 IL12RB1P42701 662 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 MAGEA3P43357 314 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 TNNT3P45378 269 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CCNHP51946 323 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 MRPS21P82921 87 aaKnown RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 BCL2L1Q07817 233 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CDH17Q12864 832 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 TRAF2Q12933 501 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SLMAPQ14BN4 828 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 MLF2Q15773 248 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 PCSK7Q16549 785 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 FAM153CQ494X1 144 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 MAP9Q49MG5 647 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 FBXO43Q4G163 708 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 DNAJC21Q5F1R6 531 aaKnown RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 EGFLAMQ63HQ2 1017 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SDE2Q6IQ49 451 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 EMBQ6PCB8 327 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SERPINA13PQ6UXR4 307 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF852Q6ZMS4 543 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 Q6ZVU0 165 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CENPUQ71F23 418 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF534Q76KX8 674 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 KDELC2Q7Z4H8 507 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CAMK1DQ8IU85 385 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 RELL1Q8IUW5 271 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 UBALD2Q8IYN6 164 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 GJD3Q8N144 294 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF513Q8N8E2 541 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CHST14Q8NCH0 376 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 OR52K1Q8NGK4 314 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 HCAR2Q8TDS4 363 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 AENQ8WTP8 325 aaKnown RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CAVIN3Q969G5 261 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms