RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 TMEM236Q5W0B7 351 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 REP15Q6BDI9 236 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 TMEM126BQ8IUX1 230 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SCUBE3Q8IX30 993 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 AFAP1L2Q8N4X5 818 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 AGBL3Q8NEM8 1001 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CMASQ8NFW8 434 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 TRPM4Q8TD43 1214 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNX19Q92543 992 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SEPT8Q92599 483 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 TANKQ92844 425 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 MFSD3Q96ES6 412 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 IL12RB2Q99665 862 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 C6orf62Q9GZU0 229 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PLAC1Q9HBJ0 212 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CHRAC1Q9NRG0 131 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 NUDT5Q9UKK9 219 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 GPSM3Q9Y4H4 160 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 RAD54BQ9Y620 910 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SOBPA7XYQ1 873 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CCNKO75909 580 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SEC24AO95486 1093 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 TNNC2P02585 160 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CES1P23141 567 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PTPN9P43378 593 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 NOVP48745 357 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CLK3P49761 638 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ATXN1P54253 815 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 NDUFA5Q16718 116 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ZNF354CQ86Y25 554 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PLD3Q8IV08 490 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ZNF420Q8TAQ5 688 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 KCNN1Q92952 543 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CHID1Q9BWS9 393 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 LHPPQ9H008 270 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 FBRSL1Q9HCM7 1045 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 RIC8BQ9NVN3 520 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 XPR1Q9UBH6 696 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CYTH4Q9UIA0 394 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 TRAF6Q9Y4K3 522 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PCDHA10Q9Y5I2 948 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 MRPL42Q9Y6G3 142 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 TMEM114B3SHH9 223 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNRPB2P08579 225 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ALOX12P18054 663 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ATP6V1B2P21281 511 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PSMB9P28065 219 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SPCS2Q15005 226 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 MAPRE2Q15555 327 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 FAM83EQ2M2I3 478 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 USP41Q3LFD5 358 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ATAD3BQ5T9A4 648 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PPP4R4Q6NUP7 873 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 MICU2Q8IYU8 434 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SH3YL1Q96HL8 342 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 PIWIL1Q96J94 861 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 ZNF347Q96SE7 839 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CNPY3Q9BT09 278 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 HGH1Q9BTY7 390 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 REXO4Q9GZR2 422 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 AGO4Q9HCK5 861 aaKnown RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SMPD3Q9NY59 655 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 MID2Q9UJV3 735 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 MFHAS1Q9Y4C4 1052 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 SCN9AQ15858 1988 aa9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 COL11A2P13942 1736 aaPredicted RBP9.86□□□□□ -0.83
TNFAIP3-210ENST00000620204 CHRM3P20309 590 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 RPS9P46781 194 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 TRIM32Q13049 653 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 GRM1Q13255 1194 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 INAVAQ3KP66 663 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 NEPROQ6NW34 567 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 EEPD1Q7L9B9 569 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 CNTD1Q8N815 330 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 MCPH1Q8NEM0 835 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 ACVR1CQ8NER5 493 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 ARPC5LQ9BPX5 153 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 C17orf80Q9BSJ5 609 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 SNRNP25Q9BV90 132 aaKnown RBP9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 TRIM15Q9C019 465 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 TBC1D13Q9NVG8 400 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 COL20A1Q9P218 1284 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 PCDHGA7Q9Y5G6 932 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 CCNE2O96020 404 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 ASNSP08243 561 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 YWHAQP27348 245 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 ARL4AP40617 200 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 SELENBP1Q13228 472 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 FAM214AQ32MH5 1076 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 VPS26BQ4G0F5 336 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 PRR23CQ6ZRP0 262 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 USP43Q70EL4 1123 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 C4orf19Q8IY42 314 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 RAB2BQ8WUD1 216 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 SLCO4A1Q96BD0 722 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 CGRRF1Q99675 332 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 CACNA2D2Q9NY47 1150 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 GIMAP2Q9UG22 337 aa9.85□□□□□ -0.83
TNFAIP3-210ENST00000620204 ITM2BQ9Y287 266 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms