RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 CDH22Q9UJ99 828 aa28.12■■■□□ 2.09
BRF1-221ENST00000619151 ZCWPW2A0A1B0GU75 182 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 NEDD8-MDP1E9PL57 170 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 PIAS1O75925 651 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 KCNA5P22460 613 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 CA4P22748 312 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 CHRNA4P43681 627 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 CES3Q6UWW8 571 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 APCDD1Q8J025 514 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 NECTIN4Q96NY8 510 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 FCRL3Q96P31 734 aaPredicted RBP28.11■■■□□ 2.09
BRF1-221ENST00000619151 NOD2Q9HC29 1040 aa28.11■■■□□ 2.09
BRF1-221ENST00000619151 TTC24A2A3L6 582 aaPredicted RBP28.1■■■□□ 2.09
BRF1-221ENST00000619151 H3BQ06 376 aaPredicted RBP28.1■■■□□ 2.09
BRF1-221ENST00000619151 CD160O95971 181 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 SNRPAP09012 282 aaKnown RBP28.1■■■□□ 2.09
BRF1-221ENST00000619151 PDPK2PQ6A1A2 396 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 NLRP9Q7RTR0 991 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 NPAS3Q8IXF0 933 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 ALKBH8Q96BT7 664 aaKnown RBP28.1■■■□□ 2.09
BRF1-221ENST00000619151 MFSD3Q96ES6 412 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 KCNK9Q9NPC2 374 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 ABCB8Q9NUT2 735 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 NSMCE4AQ9NXX6 385 aa28.1■■■□□ 2.09
BRF1-221ENST00000619151 SMG5Q9UPR3 1016 aaKnown RBP28.1■■■□□ 2.09
BRF1-221ENST00000619151 SHOX2O60902 331 aaPredicted RBP28.09■■■□□ 2.09
BRF1-221ENST00000619151 NDST3O95803 873 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 MT-ND3P03897 115 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 ATXN1LP0C7T5 689 aaKnown RBP28.09■■■□□ 2.09
BRF1-221ENST00000619151 CD70P32970 193 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 GNGT1P63211 74 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 SEPT6Q14141 434 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 DMC1Q14565 340 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 SIRPB2Q5JXA9 342 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 SLC2A11Q9BYW1 496 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 SSU72Q9NP77 194 aaKnown RBP28.09■■■□□ 2.09
BRF1-221ENST00000619151 GDE1Q9NZC3 331 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 LHX3Q9UBR4 397 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 CLEC4EQ9ULY5 219 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 WNT6Q9Y6F9 365 aa28.09■■■□□ 2.09
BRF1-221ENST00000619151 ALADP13716 330 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 TYRP14679 529 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 NMBRP28336 390 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 MAPK8P45983 427 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 RGRP47804 291 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 PITRM1Q5JRX3 1037 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 LY6G5CQ5SRR4 150 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 KCNMB4Q86W47 210 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 MAFAQ8NHW3 353 aaPredicted RBP28.08■■■□□ 2.09
BRF1-221ENST00000619151 MZB1Q8WU39 189 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 EXOC2Q96KP1 924 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 LMLNQ96KR4 655 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 CPNE1Q99829 537 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 LINC00597Q9H2U6 94 aa28.08■■■□□ 2.09
BRF1-221ENST00000619151 C20orf96Q9NUD7 363 aaPredicted RBP28.08■■■□□ 2.09
BRF1-221ENST00000619151 USP15Q9Y4E8 981 aaPredicted RBP28.08■■■□□ 2.09
BRF1-221ENST00000619151 TMEM120BA0PK00 339 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 CHN1P15882 459 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 AP1S1P61966 158 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 SULT2A1Q06520 285 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 SMAD4Q13485 552 aaKnown RBP28.08■■■□□ 2.08
BRF1-221ENST00000619151 IHHQ14623 411 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 ADGRG2Q8IZP9 1017 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 GABPB2Q8TAK5 448 aaPredicted RBP28.08■■■□□ 2.08
BRF1-221ENST00000619151 OSCP1Q8WVF1 389 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 SMARCD2Q92925 531 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 CENPTQ96BT3 561 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 DUS2Q9NX74 493 aaKnown RBP28.08■■■□□ 2.08
BRF1-221ENST00000619151 OBP2AQ9NY56 170 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 NKIRAS1Q9NYS0 192 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 GGA2Q9UJY4 613 aa28.08■■■□□ 2.08
BRF1-221ENST00000619151 FCF1Q9Y324 198 aaKnown RBP28.08■■■□□ 2.08
BRF1-221ENST00000619151 PRPF4O43172 522 aaKnown RBP eCLIP28.07■■■□□ 2.08
BRF1-221ENST00000619151 GJB3O75712 270 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 PAPSS2O95340 614 aaPredicted RBP28.07■■■□□ 2.08
BRF1-221ENST00000619151 ERVK-10P10266 1014 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 HLA-FP30511 346 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 GUCY1A3Q02108 690 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 NCEH1Q6PIU2 408 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 GET4Q7L5D6 327 aaPredicted RBP28.07■■■□□ 2.08
BRF1-221ENST00000619151 UNC5BQ8IZJ1 945 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 FGF13Q92913 245 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 ASB16Q96NS5 453 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 TDRD1Q9BXT4 1180 aaKnown RBP28.07■■■□□ 2.08
BRF1-221ENST00000619151 INTS9Q9NV88 658 aaKnown RBP28.07■■■□□ 2.08
BRF1-221ENST00000619151 SLC25A13Q9UJS0 675 aa28.07■■■□□ 2.08
BRF1-221ENST00000619151 GRXCR2A6NFK2 248 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 PABPC1P11940 636 aaKnown RBP28.06■■■□□ 2.08
BRF1-221ENST00000619151 GP5P40197 560 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 SLC18A1P54219 525 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 DNAJC3Q13217 504 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 LEXMQ3ZCV2 418 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 GRTP1Q5TC63 336 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 KIAA0930Q6ICG6 404 aaPredicted RBP28.06■■■□□ 2.08
BRF1-221ENST00000619151 PACS1Q6VY07 963 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 BPIFB1Q8TDL5 484 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 TRIB3Q96RU7 358 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 POMKQ9H5K3 350 aa28.06■■■□□ 2.08
BRF1-221ENST00000619151 FAM47DPA6NHR8 397 aa28.05■■■□□ 2.08
BRF1-221ENST00000619151 TRIM49D1C9J1S8 452 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms