RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ZNF366Q8N895 744 aa16.46■□□□□ 0.23
SNAP47-213ENST00000617596 MAFAQ8NHW3 353 aaPredicted RBP16.46■□□□□ 0.23
SNAP47-213ENST00000617596 MRGPRX2Q96LB1 330 aa16.46■□□□□ 0.23
SNAP47-213ENST00000617596 C9orf72Q96LT7 481 aa16.46■□□□□ 0.23
SNAP47-213ENST00000617596 WDR83Q9BRX9 315 aaKnown RBP16.46■□□□□ 0.23
SNAP47-213ENST00000617596 FICDQ9BVA6 458 aa16.46■□□□□ 0.23
SNAP47-213ENST00000617596 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.23
SNAP47-213ENST00000617596 SLC25A13Q9UJS0 675 aa16.46■□□□□ 0.23
SNAP47-213ENST00000617596 TBC1D3BA6NDS4 549 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 MGRN1O60291 552 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TPH1P17752 444 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 CR2P20023 1033 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 HSPA9P38646 679 aaKnown RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 CHRNA4P43681 627 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 WNT3AP56704 352 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 SESN2P58004 480 aaPredicted RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 RIPK1Q13546 671 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 PTPRNQ16849 979 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 RNF187Q5TA31 235 aaPredicted RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 IGDCC3Q8IVU1 814 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 ZBED8Q8IZ13 594 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 SH2D3CQ8N5H7 860 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 CSGALNACT1Q8TDX6 532 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TTC17Q96AE7 1141 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 ERLEC1Q96DZ1 483 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 MRGPRX3Q96LB0 322 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TRIM56Q9BRZ2 755 aaKnown RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 SCUBE2Q9NQ36 999 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 EIF2B3Q9NR50 452 aaKnown RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 ERVW-1Q9UQF0 538 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 HS3ST2Q9Y278 367 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 AAR2Q9Y312 384 aaKnown RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TTC34A8MYJ7 566 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 ANXA9O76027 345 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 ARL4CP56559 192 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 DMC1Q14565 340 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 DLG2Q15700 870 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TXNDC11Q6PKC3 985 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 KDELC1Q6UW63 502 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 PPP1R21Q6ZMI0 780 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 CAPN12Q6ZSI9 719 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 RYBPQ8N488 228 aaPredicted RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 SLC25A41Q8N5S1 370 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TERB1Q8NA31 727 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 MCUQ8NE86 351 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 UHMK1Q8TAS1 419 aaKnown RBP16.45■□□□□ 0.22
SNAP47-213ENST00000617596 FSD1LQ9BXM9 530 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TXLNGYQ9BZA5 131 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 FAM129AQ9BZQ8 928 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 HEBP1Q9NRV9 189 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 ELOVL2Q9NXB9 296 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 PCDHGC4Q9Y5F7 938 aa16.45■□□□□ 0.22
SNAP47-213ENST00000617596 TRIOO75962 3097 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 GMNCA6NCL1 334 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 GSTA1P08263 222 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 PMS2P54278 862 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 GEMP55040 296 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 GEMIN4P57678 1058 aaKnown RBP16.44■□□□□ 0.22
SNAP47-213ENST00000617596 SULT2A1Q06520 285 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 UAP1Q16222 522 aaPredicted RBP16.44■□□□□ 0.22
SNAP47-213ENST00000617596 KYNUQ16719 465 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 ALG1LQ6GMV1 187 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 Q6ZVU0 165 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 CENPUQ71F23 418 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 DNAAF3Q8N9W5 541 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 MYO19Q96H55 970 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 TBL1YQ9BQ87 522 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 CDC42EP4Q9H3Q1 356 aaKnown RBP16.44■□□□□ 0.22
SNAP47-213ENST00000617596 LRRC40Q9H9A6 602 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 TMBIM4Q9HC24 238 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 EVLQ9UI08 416 aaPredicted RBP16.44■□□□□ 0.22
SNAP47-213ENST00000617596 CHMP2BQ9UQN3 213 aa16.44■□□□□ 0.22
SNAP47-213ENST00000617596 NDC80O14777 642 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 PPFIA2O75334 1257 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 SUN1O94901 812 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 KAT7O95251 611 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 DLDP09622 509 aaKnown RBP16.43■□□□□ 0.22
SNAP47-213ENST00000617596 ADRA1AP35348 466 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 MAGEA4P43358 317 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 GALK1P51570 392 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 IFT88Q13099 833 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 MPP3Q13368 585 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 C22orf39Q6P5X5 142 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 LRRC8BQ6P9F7 803 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 EGFL6Q8IUX8 553 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 KLHDC8BQ8IXV7 354 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 UBLCP1Q8WVY7 318 aaPredicted RBP16.43■□□□□ 0.22
SNAP47-213ENST00000617596 TADA1Q96BN2 335 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 NUDCD1Q96RS6 583 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.43■□□□□ 0.22
SNAP47-213ENST00000617596 GOLGA6L10A6NI86 522 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 PIGNO95427 931 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 ACSL3O95573 720 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 SERPINF2P08697 491 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 MGAT1P26572 445 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 HSD17B3P37058 310 aa16.43■□□□□ 0.22
SNAP47-213ENST00000617596 ELK3P41970 407 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms