RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CNTFP26441 200 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 DNAJA1P31689 397 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CAPZA1P52907 286 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CREB3L1Q96BA8 519 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 MAF1Q9H063 256 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 GLRA3O75311 464 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 TMBIM6P55061 237 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 KANSL1Q7Z3B3 1105 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 MS4A14Q96JA4 679 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CNDP2Q96KP4 475 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 OR2M4Q96R27 311 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 TBCDQ9BTW9 1192 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 MALT1Q9UDY8 824 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 KCNH1O95259 989 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 FGFR3P22607 806 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 PON3Q15166 354 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 PAPD4Q6PIY7 484 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 QSOX2Q6ZRP7 698 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 SAPCD2Q86UD0 394 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 SLC25A41Q8N5S1 370 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 NOL11Q9H8H0 719 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 NME7Q9Y5B8 376 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 NR3C2P08235 984 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 GNA15P30679 374 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF211Q13398 564 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 VPS45Q9NRW7 570 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 INVSQ9Y283 1065 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 SPACA6W5XKT8 324 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ERN1O75460 977 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 RBL1P28749 1068 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 LCN1P31025 176 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 GALCP54803 685 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 OSTNP61366 133 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 GRK1Q15835 563 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 GFOD2Q3B7J2 385 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 WDR45BQ5MNZ6 344 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 KLHDC7AQ5VTJ3 777 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF276Q8N554 614 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 EEF2KMTQ96G04 330 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CHP1Q99653 195 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 PRDM4Q9UKN5 801 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 FARP1Q9Y4F1 1045 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 FCER1AP12319 257 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ALDH3B2P48448 385 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 RPA4Q13156 261 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 PAGE2BQ5JRK9 111 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ERAP2Q6P179 960 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CDYL2Q8N8U2 506 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 NAT9Q9BTE0 207 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 CHD2O14647 1828 aaKnown RBP9.34□□□□□ -0.91
COL12A1-211ENST00000615798 A0A087X0T9 212 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 ILVBLA1L0T0 632 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 APRTP07741 180 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 DCKP27707 260 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 THOP1P52888 689 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 IFT46Q9NQC8 304 aa9.34□□□□□ -0.91
COL12A1-211ENST00000615798 KLHL33A6NCF5 533 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 AKT1P31749 480 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 SERPINF1P36955 418 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 SCNN1DP51172 638 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 SSX9Q7RTT3 188 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 SLC22A9Q8IVM8 553 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 GLYCTKQ8IVS8 523 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 CD302Q8IX05 232 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 FUKQ8N0W3 1084 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 CELF1Q92879 486 aaKnown RBP9.34□□□□□ -0.92
COL12A1-211ENST00000615798 VCPIP1Q96JH7 1222 aa9.34□□□□□ -0.92
COL12A1-211ENST00000615798 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.92
COL12A1-211ENST00000615798 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 PYDC1Q8WXC3 89 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 HSPA12BQ96MM6 686 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 MGME1Q9BQP7 344 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 RBM12Q9NTZ6 932 aaKnown RBP9.33□□□□□ -0.92
COL12A1-211ENST00000615798 PAK5Q9P286 719 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 VANGL2Q9ULK5 521 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 ADAM10O14672 748 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 MBP02144 154 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 HNRNPH3P31942 346 aaKnown RBP9.33□□□□□ -0.92
COL12A1-211ENST00000615798 CASP7P55210 303 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 TNK2Q07912 1038 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 CACNB2Q08289 660 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-211ENST00000615798 XKR3Q5GH77 459 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 FAXCQ5TGI0 409 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 GALNT15Q8N3T1 639 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 METTL25Q8N6Q8 603 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 TMEM203Q969S6 136 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 C3orf49Q96BT1 292 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 ARHGEF26Q96DR7 871 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 DPP3Q9NY33 737 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 RAB19A4D1S5 217 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 DUOXA2Q1HG44 320 aa9.33□□□□□ -0.92
COL12A1-211ENST00000615798 PTPN20Q4JDL3 420 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms