RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
ATF3-211ENST00000613954 HSFY1Q96LI6 401 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 KLHL32Q96NJ5 620 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 GPR22Q99680 433 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 EFHD1Q9BUP0 239 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 PRDM12Q9H4Q4 367 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 CAB39LQ9H9S4 337 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
ATF3-211ENST00000613954 MTSS1O43312 755 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 HCRTO43612 131 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 GABBR2O75899 941 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 PCSK6P29122 969 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 AFF1P51825 1210 aaKnown RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 EMP3P54852 163 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 NUP107P57740 925 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 RHDQ02161 417 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 SLC12A1Q13621 1099 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 SLC25A52Q3SY17 297 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 ACBD5Q5T8D3 534 aaPredicted RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 KRT80Q6KB66 452 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 DHRS4L2Q6PKH6 230 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 AMIGO2Q86SJ2 522 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 OSTM1Q86WC4 334 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 CARM1Q86X55 608 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 TMEM86AQ8N2M4 240 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 STYXQ8WUJ0 223 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 RMND5BQ96G75 393 aaPredicted RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 MAELQ96JY0 434 aaKnown RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 AGAP2Q99490 1192 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 MCMBPQ9BTE3 642 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 BRD8Q9H0E9 1235 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 C20orf96Q9NUD7 363 aaPredicted RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 TBCCD1Q9NVR7 557 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 TUBA8Q9NY65 449 aaPredicted RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 ZDHHC2Q9UIJ5 367 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 MFHAS1Q9Y4C4 1052 aa11.32□□□□□ -0.6
ATF3-211ENST00000613954 COPG1Q9Y678 874 aaKnown RBP11.32□□□□□ -0.6
ATF3-211ENST00000613954 TCAF2A6NFQ2 919 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 NPHS1O60500 1241 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 STAMBPO95630 424 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 AMHP03971 560 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 LCP1P13796 627 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 GMPRP36959 345 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 DPP6P42658 865 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SULT1E1P49888 294 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 CLCNKBP51801 687 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 NAGLUP54802 743 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 PSME3P61289 254 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 IKBKEQ14164 716 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 CYTH1Q15438 398 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 DLG2Q15700 870 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 UGP2Q16851 508 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 IL23RQ5VWK5 629 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 ITPRIPL1Q6GPH6 555 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 FAM131BQ86XD5 332 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 AFAP1L2Q8N4X5 818 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 CLEC4CQ8WTT0 213 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 PBXIP1Q96AQ6 731 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 FAR2Q96K12 515 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SCYL1Q96KG9 808 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 C1QTNF1Q9BXJ1 281 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 RHOJQ9H4E5 214 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 VPS45Q9NRW7 570 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 RGS18Q9NS28 235 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 ADA2Q9NZK5 511 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 IPO11Q9UI26 975 aaKnown RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 TRHDEQ9UKU6 1024 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 G3BP2Q9UN86 482 aaKnown RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 H3BNH8 94 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 ZNF701M0R085 212 aaPredicted RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 TK2O00142 265 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 GABRDO14764 452 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 INPPL1O15357 1258 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 ZSCAN9O15535 394 aaPredicted RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 BMP10O95393 424 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 PAX3P23760 479 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 PTPN3P26045 913 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 ADORA2BP29275 332 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SLC7A1P30825 629 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 MSX2P35548 267 aaPredicted RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 KPNA2P52292 529 aaKnown RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 AIF1P55008 147 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 MTA1Q13330 715 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 MBTPS1Q14703 1052 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 SMAD1Q15797 465 aaKnown RBP11.31□□□□□ -0.6
ATF3-211ENST00000613954 UPP1Q16831 310 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
ATF3-211ENST00000613954 TRIM73Q86UV7 250 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms