RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 KLF10Q13118 480 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 DPYSL3Q14195 570 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 CSHL1Q14406 222 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 EPC2Q52LR7 807 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 BHLHB9Q6PI77 547 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 POTEHQ6S545 545 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 KBTBD7Q8WVZ9 684 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 BAP1Q92560 729 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 FCGR1BQ92637 280 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 FBXO32Q969P5 355 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 ZCCHC2Q9C0B9 1178 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 SH3BP4Q9P0V3 963 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 ERVK-11Q9UQG0 969 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 DGKBQ9Y6T7 804 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 ASTN2O75129 1339 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 FER1L4A9Z1Z3 1794 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 BCLAF3A2AJT9 711 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 TPP1O14773 563 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 USP12O75317 370 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 RPN2P04844 631 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 ITGAVP06756 1048 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 BPGMP07738 259 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 CSNK2BP67870 215 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 RASAL3Q86YV0 1011 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 HPS6Q86YV9 775 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 OR8H3Q8N146 312 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 TARS2Q9BW92 718 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 TMEM39BQ9GZU3 492 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 EVA1BQ9NVM1 165 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 FKBP14Q9NWM8 211 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 USP18Q9UMW8 372 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 TBC1D30Q9Y2I9 924 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 GIT1Q9Y2X7 761 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 APOC4-APOC2K7ER74 178 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 TBX10O75333 385 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 AKAP3O75969 853 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 TOP3BO95985 862 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 APOC2P02655 101 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 GPIP06744 558 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 PABPC4LP0CB38 370 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 CYP2A6P11509 494 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 INHBEP58166 350 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 NTRK3Q16288 839 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 GARNL3Q5VVW2 1013 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 USP43Q70EL4 1123 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 SPAG16Q8N0X2 631 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 CCDC185Q8N715 623 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 CLHC1Q8NHS4 586 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 ACSF2Q96CM8 615 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 CENPNQ96H22 339 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 RBM4BQ9BQ04 359 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 RBM4Q9BWF3 364 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 FAM124BQ9H5Z6 455 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 KAT8Q9H7Z6 458 aaKnown RBP6.93□□□□□ -1.3
CLCN3-211ENST00000613795 PCDHB12Q9Y5F1 795 aa6.93□□□□□ -1.3
CLCN3-211ENST00000613795 G3V2T6 193 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 KPNA3O00505 521 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 LIASO43766 372 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 MED24O75448 989 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 CHRM3P20309 590 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 FECHP22830 423 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 PTPN3P26045 913 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 IFNGR2P38484 337 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 PPP3CCP48454 512 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 MAPK12P53778 367 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 TWF1Q12792 350 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 FAM187BQ17R55 369 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 RFWD3Q6PCD5 774 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 SPESP1Q6UW49 350 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 USP50Q70EL3 339 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 KCNMB4Q86W47 210 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 ABRAQ8N0Z2 381 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 ASCC1Q8N9N2 400 aaKnown RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 EEF1AKMT1Q8WVE0 214 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 CHCHD6Q9BRQ6 235 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 MND1Q9BWT6 205 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 NLNQ9BYT8 704 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 POMKQ9H5K3 350 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 DNAJC11Q9NVH1 559 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 DDX43Q9NXZ2 648 aaKnown RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 SLC37A4O43826 429 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 NDUFS2O75306 463 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 CST1P01037 141 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 CHI3L1P36222 383 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 THPOP40225 353 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 RPS9P46781 194 aaKnown RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 PPATQ06203 517 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 PGM5Q15124 567 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 NR6A1Q15406 480 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 IQSEC1Q6DN90 963 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 CCSAPQ6IQ19 270 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-211ENST00000613795 ZBTB46Q86UZ6 589 aa6.92□□□□□ -1.3
CLCN3-211ENST00000613795 PDSS2Q86YH6 399 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms