RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NFKBIAP25963 317 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 CXCR5P32302 372 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 DHPSP49366 369 aaPredicted RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 ADPRHP54922 357 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 ZBTB17Q13105 803 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TEX44Q53QW1 395 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 PIP5KL1Q5T9C9 394 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 LYSMD4Q5XG99 296 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 PMS2CLQ68D20 193 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3GQ6DHY5 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 ALG1LQ6GMV1 187 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 ITPRIPL1Q6GPH6 555 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3CQ6IPX1 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 NEK5Q6P3R8 708 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 B4GALNT4Q76KP1 1039 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 TTC7BQ86TV6 843 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3Q8IZP1 549 aaPredicted RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.4□□□□□ -0.26
MDC1-209ENST00000613547 AGAP3Q96P47 875 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 NOD2Q9HC29 1040 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 PREBQ9HCU5 417 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 RAPGEFL1Q9UHV5 662 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 GMEB2Q9UKD1 530 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 ATP8A1Q9Y2Q0 1164 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TSPAN11A1L157 253 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 PLK4O00444 970 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 KCNN4O15554 427 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 AP1G1O43747 822 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 TCP1P17987 556 aaKnown RBP13.39□□□□□ -0.27
MDC1-209ENST00000613547 PTPN3P26045 913 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 RBL1P28749 1068 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 DSC2Q02487 901 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 ELP6Q0PNE2 266 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 LPAL2Q16609 132 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 KIAA0895LQ68EN5 471 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 PID1Q7Z2X4 250 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 ADAT2Q7Z6V5 191 aaKnown RBP13.39□□□□□ -0.27
MDC1-209ENST00000613547 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 CNTD1Q8N815 330 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 SUMF1Q8NBK3 374 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 PDCD6IPQ8WUM4 868 aaKnown RBP13.39□□□□□ -0.27
MDC1-209ENST00000613547 ZNF419Q96HQ0 510 aaPredicted RBP13.39□□□□□ -0.27
MDC1-209ENST00000613547 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 HSPA12BQ96MM6 686 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 NAPGQ99747 312 aaPredicted RBP13.39□□□□□ -0.27
MDC1-209ENST00000613547 FAM118BQ9BPY3 351 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 CEP41Q9BYV8 373 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
MDC1-209ENST00000613547 NYNRINQ9P2P1 1898 aaKnown RBP13.39□□□□□ -0.27
MDC1-209ENST00000613547 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 TTC24A2A3L6 582 aaPredicted RBP13.38□□□□□ -0.27
MDC1-209ENST00000613547 PRR23AA6NEV1 266 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 METTL12A8MUP2 240 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 UPK3BL1B0FP48 263 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 UPK3BL2E5RIL1 263 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 CES2O00748 559 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 TSPAN6O43657 245 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 FSBPO95073 299 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 PCDH8O95206 1070 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 CPP00450 1065 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 RETP07949 1114 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
MDC1-209ENST00000613547 CCR5P51681 352 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 WASHC5Q12768 1159 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 ARMCX6Q7L4S7 300 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 RGL4Q8IZJ4 473 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 SLC35B2Q8TB61 432 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 SNX19Q92543 992 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 PPP1R2P1Q96PQ5 205 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 SLC25A51Q9H1U9 297 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 C6orf106Q9H6K1 298 aaPredicted RBP13.38□□□□□ -0.27
MDC1-209ENST00000613547 GLOD4Q9HC38 313 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 R3HDM2Q9Y2K5 976 aaKnown RBP13.38□□□□□ -0.27
MDC1-209ENST00000613547 PCDHB9Q9Y5E1 797 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 PCDHGA5Q9Y5G8 931 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 RAI2Q9Y5P3 530 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
MDC1-209ENST00000613547 PGRMC1O00264 195 aaKnown RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 TRAFD1O14545 582 aaPredicted RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 LIASO43766 372 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 GJB3O75712 270 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms