RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZNF143P52747 638 aaPredicted RBP10.96□□□□□ -0.66
FAM3A-221ENST00000612856 IL1RL1Q01638 556 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 GRM2Q14416 872 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 GALNT3Q14435 633 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 NRF1Q16656 503 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 RTP2Q5QGT7 225 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 DEFB107AQ8IZN7 70 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 TMCO5AQ8N6Q1 288 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 OR52K1Q8NGK4 314 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 MECRQ9BV79 373 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 RRN3Q9NYV6 651 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 NDUFA13Q9P0J0 144 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 SENP1Q9P0U3 644 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 UBA2Q9UBT2 640 aaPredicted RBP10.96□□□□□ -0.66
FAM3A-221ENST00000612856 CACNA1HO95180 2353 aa10.96□□□□□ -0.66
FAM3A-221ENST00000612856 ATG2BQ96BY7 2078 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 MYH9P35579 1960 aaKnown RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 SMIM31A0A1B0GVY4 71 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 OR6C75A6NL08 312 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 GUCA1CO95843 209 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 CCDC166P0CW27 439 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 MTA1Q13330 715 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ACOX1Q15067 660 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 NAPEPLDQ6IQ20 393 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 CNKSR3Q6P9H4 555 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PAOXQ6QHF9 649 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 LCLAT1Q6UWP7 414 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 NCCRP1Q6ZVX7 275 aaPredicted RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 GATA6Q92908 595 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 EME1Q96AY2 570 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 MAGEB10Q96LZ2 347 aaPredicted RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 MAF1Q9H063 256 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ST6GALNAC4Q9H4F1 302 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ARMC7Q9H6L4 198 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PCDHGC4Q9Y5F7 938 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 HEMK1Q9Y5R4 338 aaPredicted RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 DOCK5Q9H7D0 1870 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 INPP4BO15327 924 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PSTPIP1O43586 416 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 OAS1P00973 400 aaKnown RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 CYP1A1P04798 512 aaPredicted RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 UGT2B4P06133 528 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 CTGFP29279 349 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PFKPQ01813 784 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 KIF19Q2TAC6 998 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 DHDDSQ86SQ9 333 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 SMG8Q8ND04 991 aaKnown RBP10.95□□□□□ -0.66
FAM3A-221ENST00000612856 NCANO14594 1321 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 SLC38A8A6NNN8 435 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 LRCH4O75427 683 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 BEST1O76090 585 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 NFKB1P19838 968 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ADRA1BP35368 520 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ELK3P41970 407 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ASPAP45381 313 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 ZBTB17Q13105 803 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PDK2Q15119 407 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 CA9Q16790 459 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 NADK2Q4G0N4 442 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 SPDYAQ5MJ70 313 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PHACTR4Q8IZ21 702 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 UROC1Q96N76 676 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PAFAH2Q99487 392 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 OMDQ99983 421 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 C17orf80Q9BSJ5 609 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 HPS4Q9NQG7 708 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 CNGB3Q9NQW8 809 aa10.95□□□□□ -0.66
FAM3A-221ENST00000612856 WDR27A2RRH5 827 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 PRR5-ARHGAP8B1AHC4 643 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 NDUFB5O43674 189 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D4O60343 1298 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 EPHX1P07099 455 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 UQCRBP14927 111 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 IGFBP6P24592 240 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ARHGAP8P85298 464 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 SFT2D3Q587I9 215 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ATG16L1Q676U5 607 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 KLHDC10Q6PID8 442 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 CLEC20AQ6ZU45 233 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 AMIGO2Q86SJ2 522 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 CLVS1Q8IUQ0 354 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 SIX5Q8N196 739 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 SPATA6LQ8N4H0 392 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 DDHD1Q8NEL9 900 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 LZICQ8WZA0 190 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ACSS2Q9NR19 701 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 H3BSA7 217 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 TRMUO75648 421 aaKnown RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 LRIG2O94898 1065 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ENO3P13929 434 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 RENBPP51606 427 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 HDAC4P56524 1084 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 POU5F1Q01860 360 aaKnown RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 LRRC26Q2I0M4 334 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 PLEKHA7Q6IQ23 1121 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms