RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 KRIT1O00522 736 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 UGT2B4P06133 528 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 TFE3P19532 575 aaPredicted RBP17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 HK3P52790 923 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 RNASE9P60153 205 aaKnown RBP17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 GNA12Q03113 381 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 ARHGAP44Q17R89 818 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 ACBD5Q5T8D3 534 aaPredicted RBP17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 RD3Q7Z3Z2 195 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 DRC7Q8IY82 874 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 HTR3CQ8WXA8 447 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 TMEM159Q96B96 161 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 DHTKD1Q96HY7 919 aaPredicted RBP17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 CMKLR1Q99788 373 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 EPAS1Q99814 870 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 ZYG11BQ9C0D3 744 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 TMPRSS4Q9NRS4 437 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 FOXJ2Q9P0K8 574 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 ACTL7AQ9Y615 435 aa17.44■□□□□ 0.38
CSNK1E-215ENST00000612795 MMP20O60882 483 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 RASGRP1O95267 797 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 F9P00740 461 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 GP1BBP13224 206 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 WT1P19544 449 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 SNRPD1P62314 119 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 CLCA4Q14CN2 919 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 POLD3Q15054 466 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 PTRH1Q86Y79 214 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 TRIM59Q8IWR1 403 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 Q8N9G6 341 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 ZNF397Q8NF99 534 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 OR2AP1Q8NGE2 309 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 USP7Q93009 1102 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 TSACCQ96A04 125 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 ISG20Q96AZ6 181 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 FAM81BQ96LP2 452 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 C1orf74Q96LT6 269 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 KLHL32Q96NJ5 620 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 OSBPL1AQ9BXW6 950 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 ADNPQ9H2P0 1102 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 MBNL1Q9NR56 388 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 PCDHGC3Q9UN70 934 aa17.43■□□□□ 0.38
CSNK1E-215ENST00000612795 LRRK2Q5S007 2527 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 A0A1W2PQC6 194 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 CD82P27701 267 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 HTR1BP28222 390 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ETFBP38117 255 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ETV5P41161 510 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 PPP1R2P41236 205 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 GEMIN4P57678 1058 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 MORC3Q14149 939 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 IRF4Q15306 451 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ALG11Q2TAA5 492 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 KLHL40Q2TBA0 621 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 PTPN20Q4JDL3 420 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 PHF19Q5T6S3 580 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 TMEM164Q5U3C3 297 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ISM2Q6H9L7 571 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 GJB7Q6PEY0 223 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 TTC7BQ86TV6 843 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ZDHHC17Q8IUH5 632 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 TP53I13Q8NBR0 393 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ZNF564Q8TBZ8 553 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 TBCBQ99426 244 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 WRAP53Q9BUR4 548 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 EPN3Q9H201 632 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ATP6V1DQ9Y5K8 247 aa17.42■□□□□ 0.38
CSNK1E-215ENST00000612795 ARHGEF17Q96PE2 2063 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 TMEM110-MUSTN1A8MSY1 372 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 BECN2A8MW95 431 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 AREL1O15033 823 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 GNA14O95837 355 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 GSRP00390 522 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 PEX5P50542 639 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 SKIDA1Q1XH10 827 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 BORAQ6PGQ7 559 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 ENPP7Q6UWV6 458 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 DTX1Q86Y01 620 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 ATL2Q8NHH9 583 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 PGAP3Q96FM1 320 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 AKAP7Q9P0M2 348 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 ZNF212Q9UDV6 495 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 KLQ9UEF7 1012 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 HOOK1Q9UJC3 728 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 RNF215Q9Y6U7 377 aa17.41■□□□□ 0.38
CSNK1E-215ENST00000612795 BICDL2A1A5D9 508 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 C9orf172C9J069 976 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 POP4O95707 220 aaKnown RBP17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 KRT9P35527 623 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 ACVRL1P37023 503 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 ATP1A2P50993 1020 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 ZFP36L1Q07352 338 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms