RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 SNRNP25Q9BV90 132 aaKnown RBP17.57■□□□□ 0.4
PRKN-209ENST00000612485 DUSP23Q9BVJ7 150 aa17.57■□□□□ 0.4
PRKN-209ENST00000612485 PDFQ9HBH1 243 aa17.57■□□□□ 0.4
PRKN-209ENST00000612485 EVA1BQ9NVM1 165 aa17.57■□□□□ 0.4
PRKN-209ENST00000612485 NLGN3Q9NZ94 848 aa17.57■□□□□ 0.4
PRKN-209ENST00000612485 LHX3Q9UBR4 397 aa17.57■□□□□ 0.4
PRKN-209ENST00000612485 ARID1BQ8NFD5 2236 aaPredicted RBP17.57■□□□□ 0.4
PRKN-209ENST00000612485 LAMA5O15230 3695 aa17.57■□□□□ 0.4
PRKN-209ENST00000612485 PKD1L2Q7Z442 2459 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 PRAMEF11O60813 436 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 TM7SF2O76062 418 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 CSF2P04141 144 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 SKILP12757 684 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 TIMP2P16035 220 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 MIPP30301 263 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 ELP6Q0PNE2 266 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 PDE1CQ14123 709 aaPredicted RBP17.56■□□□□ 0.4
PRKN-209ENST00000612485 CA9Q16790 459 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 ZNF542PQ5EBM4 170 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 RFX8Q6ZV50 586 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 ARFGAP1Q8N6T3 406 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 RFFLQ8WZ73 363 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 NXPE2Q96DL1 559 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 EXOC2Q96KP1 924 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 PEBP4Q96S96 227 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 KCTD15Q96SI1 283 aaPredicted RBP17.56■□□□□ 0.4
PRKN-209ENST00000612485 SLC39A8Q9C0K1 460 aa17.56■□□□□ 0.4
PRKN-209ENST00000612485 J3KR12 359 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 SCAMP1O15126 338 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 INSIG1O15503 277 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 MMP20O60882 483 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 NME1P15531 152 aaKnown RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 ERCC2P18074 760 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 PAPOLAP51003 745 aaKnown RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 CLDN6P56747 220 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 PFN3P60673 137 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 TARDBPQ13148 414 aaKnown RBP eCLIP17.55■□□□□ 0.4
PRKN-209ENST00000612485 PTK2BQ14289 1009 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 KLHL40Q2TBA0 621 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 TDRD12Q587J7 1177 aaKnown RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 PPP6R3Q5H9R7 873 aaPredicted RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 LRRC73Q5JTD7 316 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 CFAP58Q5T655 872 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 CACTIN-AS1Q8N1I8 211 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 CENPTQ96BT3 561 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 ZNF641Q96N77 438 aaPredicted RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 TRIM7Q9C029 511 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 ISCUQ9H1K1 167 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 SUV39H2Q9H5I1 410 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 USP29Q9HBJ7 922 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 MYO1AQ9UBC5 1043 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 LHX6Q9UPM6 363 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 RAXQ9Y2V3 346 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 BZW2Q9Y6E2 419 aaKnown RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 ANKRD11Q6UB99 2663 aaPredicted RBP17.55■□□□□ 0.4
PRKN-209ENST00000612485 FAM208BQ5VWN6 2430 aa17.55■□□□□ 0.4
PRKN-209ENST00000612485 KNTC1P50748 2209 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 A0A1W2PQJ5 194 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 TSPAN11A1L157 253 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 SYCE3A1L190 88 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 TOR1BO14657 336 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 LRCH4O75427 683 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 PALMO75781 387 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 PIGNO95427 931 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 GIMD1P0DJR0 217 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 CKMT1AP12532 417 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 PCK1P35558 622 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 HCAR3P49019 387 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 DUSP3P51452 185 aaPredicted RBP17.54■□□□□ 0.4
PRKN-209ENST00000612485 THOP1P52888 689 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 YPEL5P62699 121 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 FANCCQ00597 558 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 ACAP1Q15027 740 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 TMEM52BQ4KMG9 183 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 VPS36Q86VN1 386 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 FAM181AQ8N9Y4 354 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 ZNF548Q8NEK5 533 aaPredicted RBP17.54■□□□□ 0.4
PRKN-209ENST00000612485 BTN2A2Q8WVV5 523 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 TUBGCP5Q96RT8 1024 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 ZWILCHQ9H900 591 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 SP110Q9HB58 689 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 RALYQ9UKM9 306 aaKnown RBP17.54■□□□□ 0.4
PRKN-209ENST00000612485 CLCA2Q9UQC9 943 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 GPSM3Q9Y4H4 160 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 CSNK1G3Q9Y6M4 447 aa17.54■□□□□ 0.4
PRKN-209ENST00000612485 K7ESM1 405 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 DFFAO00273 331 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 JUNDP17535 347 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 ITIH2P19823 946 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 IGFALSP35858 605 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 CSNK1DP48730 415 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 INSM1Q01101 510 aaPredicted RBP17.53■□□□□ 0.4
PRKN-209ENST00000612485 RFTN1Q14699 578 aaPredicted RBP17.53■□□□□ 0.4
PRKN-209ENST00000612485 UGP2Q16851 508 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 AFMIDQ63HM1 303 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 ERAP2Q6P179 960 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 BRAT1Q6PJG6 821 aa17.53■□□□□ 0.4
PRKN-209ENST00000612485 CYP4V2Q6ZWL3 525 aaPredicted RBP17.53■□□□□ 0.4
PRKN-209ENST00000612485 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms