RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 C11orf84Q9BUA3 381 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 VPS37BQ9H9H4 285 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 DDIT4Q9NX09 232 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 RAB26Q9ULW5 256 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 SOX13Q9UN79 622 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 FAM72CH0Y354 149 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 I6L893 689 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 KDM1AO60341 852 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 TGDSO95455 350 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 PTPN9P43378 593 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 PDIA2Q13087 525 aaKnown RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 ZBTB17Q13105 803 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 FAXCQ5TGI0 409 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 FAM72AQ5TYM5 149 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 FAM72DQ6L9T8 149 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 FAM72BQ86X60 149 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 HPS6Q86YV9 775 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 Q8N9G6 341 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 SLC35B2Q8TB61 432 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 KCTD13Q8WZ19 329 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 PKMYT1Q99640 499 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CCDC106Q9BWC9 280 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 VPS11Q9H270 941 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 ZNF395Q9H8N7 513 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 CYP4F11Q9HBI6 524 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 XAB2Q9HCS7 855 aaKnown RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 MTMR10Q9NXD2 777 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 KLHL3Q9UH77 587 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 ADAM28Q9UKQ2 775 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CORINQ9Y5Q5 1042 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 PSMD12O00232 456 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CCNT2O60583 730 aaKnown RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 SIN3BO75182 1162 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 GUCY1B2O75343 617 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 LTFP02788 710 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 ACRP10323 421 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CD247P20963 164 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 NR4A1P22736 598 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 NUMBP49757 651 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 TIGD2Q4W5G0 525 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 BSPRYQ5W0U4 402 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 USP43Q70EL4 1123 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CLVS1Q8IUQ0 354 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 CCDC89Q8N998 374 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 TBC1D15Q8TC07 691 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CENPIQ92674 756 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 HPS1Q92902 700 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 TTC17Q96AE7 1141 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CLK4Q9HAZ1 481 aaKnown RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 MARCOQ9UEW3 520 aaPredicted RBP16.15■□□□□ 0.18
RTN1-209ENST00000611068 SFMBT1Q9UHJ3 866 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 DSEQ9UL01 958 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 PCDHB8Q9UN66 801 aa16.15■□□□□ 0.18
RTN1-209ENST00000611068 CHRNB1P11230 501 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 NOS2P35228 1153 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 CREB5Q02930 508 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 CAV1Q03135 178 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 SLC10A2Q12908 348 aaPredicted RBP16.14■□□□□ 0.17
RTN1-209ENST00000611068 RTP2Q5QGT7 225 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 PCYOX1LQ8NBM8 494 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 RNF34Q969K3 372 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 C12orf43Q96C57 262 aaKnown RBP16.14■□□□□ 0.17
RTN1-209ENST00000611068 CEP41Q9BYV8 373 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 SHCBP1LQ9BZQ2 653 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 POMPQ9Y244 141 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 SF3B1O75533 1304 aaKnown RBP eCLIP16.14■□□□□ 0.17
RTN1-209ENST00000611068 MSI1O43347 362 aaKnown RBP16.14■□□□□ 0.17
RTN1-209ENST00000611068 INHBBP09529 407 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 KITP10721 976 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 PTPN2P17706 415 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 TAMM41Q96BW9 452 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 ISOC1Q96CN7 298 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 SLC7A5P2Q9GIP4 190 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 CDH19Q9H159 772 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 MARCH5Q9NX47 278 aa16.14■□□□□ 0.17
RTN1-209ENST00000611068 TCRBV7S3A2A0A539 114 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 APOC4-APOC2K7ER74 178 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 APOL1O14791 398 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 DAB1O75553 588 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 ATE1O95260 518 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 APOC2P02655 101 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 CDH15P55291 814 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 TAZQ16635 292 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 LRRC26Q2I0M4 334 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 SPOUT1Q5T280 376 aaKnown RBP16.13■□□□□ 0.17
RTN1-209ENST00000611068 ANKRD22Q5VYY1 191 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 GPR180Q86V85 440 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 RELL1Q8IUW5 271 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 PQLC1Q8N2U9 271 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 THAP11Q96EK4 314 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 NPY6RQ99463 290 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 CDC14AQ9UNH5 594 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 KCNN4O15554 427 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 ENDOD1O94919 500 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 CPB1P15086 417 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 RBL1P28749 1068 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 PTPN7P35236 360 aa16.13■□□□□ 0.17
RTN1-209ENST00000611068 BASP1P80723 227 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms