RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 WARS2Q9UGM6 360 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SOX13Q9UN79 622 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 VWA7Q9Y334 891 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 A0A1B0GVM2 712 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TCAF2A6NFQ2 919 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MYO1GB0I1T2 1018 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 C5orf58C9J3I9 102 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MATN3O15232 486 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CD3EAPO15446 510 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TBC1D4O60343 1298 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 STBD1O95210 358 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 EDN1P05305 212 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CLTBP09497 229 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MLNP12872 115 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MC4RP32245 332 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 GRIA4P48058 902 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TTPAP49638 278 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PITX1P78337 314 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SLC25A11Q02978 314 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PPIGQ13427 754 aaKnown RBP eCLIP7.34□□□□□ -1.236e-6■□□□□ 9.4
CSDE1-218ENST00000610726 CRY1Q16526 586 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CST9Q5W186 159 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 DNAJC14Q6Y2X3 702 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 BNC2Q6ZN30 1099 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 RRM2BQ7LG56 351 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MILR1Q7Z6M3 343 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 DNAJB7Q7Z6W7 309 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CLEC4FQ8N1N0 589 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 STK40Q8N2I9 435 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 MIER2Q8N344 545 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 WDTC1Q8N5D0 677 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 CSGALNACT1Q8TDX6 532 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TRPC4APQ8TEL6 797 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 SERAC1Q96JX3 654 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TEKT5Q96M29 485 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PPP1R10Q96QC0 940 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 GBA3Q9H227 469 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TNKS2Q9H2K2 1166 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 PARVBQ9HBI1 364 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 TDRKHQ9Y2W6 561 aaKnown RBP7.34□□□□□ -1.23
CSDE1-218ENST00000610726 RAI2Q9Y5P3 530 aa7.34□□□□□ -1.23
CSDE1-218ENST00000610726 USP54Q70EL1 1684 aa7.34□□□□□ -1.24
CSDE1-218ENST00000610726 IFRD1O00458 451 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 BEST1O76090 585 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KRT6AP02538 564 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CHRNA1P02708 482 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KRT6BP04259 564 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 HOXB8P17481 243 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 DRD4P21917 467 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MAPK8P45983 427 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KRT6CP48668 564 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 RPL14P50914 215 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ATP6AP1LQ52LC2 224 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 SCIMPQ6UWF3 145 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 SNX32Q86XE0 403 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 C10orf107Q8IVU9 208 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TAGAPQ8N103 731 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF557Q8N988 423 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FAM162AQ96A26 154 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 AZIN2Q96A70 460 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CNDP1Q96KN2 507 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MARK4Q96L34 752 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MYOCQ99972 504 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 RHOJQ9H4E5 214 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CD248Q9HCU0 757 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZDHHC18Q9NUE0 388 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KIAA1522Q9P206 1035 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CITO14578 2027 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 A0A1W2PRU2 124 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ZBTB14O43829 449 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 DNAJC8O75937 253 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CYP2A7P20853 494 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ATP5F1P24539 256 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 LRPAP1P30533 357 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 SKIV2L2P42285 1042 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ARL4DP49703 201 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 KCNQ1P51787 676 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 GAD2Q05329 585 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 HNRNPDQ14103 355 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PGS1Q32NB8 556 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TXNDC8Q6A555 127 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FAM45BPQ6NSW5 357 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 AFTPHQ6ULP2 937 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 OR56A4Q8NGH8 313 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CXorf38Q8TB03 319 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 FAM45AQ8TCE6 357 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 ACMSDQ8TDX5 336 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PEBP4Q96S96 227 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 CYTH4Q9UIA0 394 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 DYRK1BQ9Y463 629 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 A0A087X1B8 175 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MGAT4DA6NG13 374 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PDE5AO76074 875 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 PROCP04070 461 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 WASP42768 502 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MPP1Q00013 466 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 TBL3Q12788 808 aaKnown RBP7.33□□□□□ -1.24
CSDE1-218ENST00000610726 USP4Q13107 963 aa7.33□□□□□ -1.24
CSDE1-218ENST00000610726 MED21Q13503 144 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms