RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	KRIT1	O00522	736 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	NTN3	O00634	580 aa	Predicted RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	NEMP1	O14524	444 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	TOR1B	O14657	336 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	MUSK	O15146	869 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	YY2	O15391	372 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	LRIG2	O94898	1065 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	CYP1A1	P04798	512 aa	Predicted RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	PRKCSH	P14314	528 aa	Predicted RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	MMP8	P22894	467 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	RBMS1	P29558	406 aa	Known RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	MLLT3	P42568	568 aa	Predicted RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	PTPN9	P43378	593 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	C1orf61	Q13536	156 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	PTK2B	Q14289	1009 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	POLD3	Q15054	466 aa	Predicted RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	CRTC1	Q6UUV9	634 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	FAM114A1	Q8IWE2	563 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	WDR48	Q8TAF3	677 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	RXFP2	Q8WXD0	754 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	NAT6	Q93015	286 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805	NOL6	Q9H6R4	1146 aa	Known RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	MBNL1	Q9NR56	388 aa	Known RBP	21.3	■■□□□ 1
NECAB3-222	ENST00000607805	MFHAS1	Q9Y4C4	1052 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805		K7ENP7	123 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	KDELR3	O43731	214 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	THOP1	P52888	689 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	UBE2H	P62256	183 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	TPD52L1	Q16890	204 aa	Predicted RBP	21.29	■■□□□ 1
NECAB3-222	ENST00000607805	ARL13B	Q3SXY8	428 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	21.29	■■□□□ 1
NECAB3-222	ENST00000607805	INO80C	Q6PI98	192 aa	Predicted RBP	21.29	■■□□□ 1
NECAB3-222	ENST00000607805	GDPD4	Q6W3E5	623 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	LEKR1	Q6ZMV7	388 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	MACC1	Q6ZN28	852 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	STRADA	Q7RTN6	431 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	VPS36	Q86VN1	386 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	ZNF677	Q86XU0	584 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	RYBP	Q8N488	228 aa	Predicted RBP	21.29	■■□□□ 1
NECAB3-222	ENST00000607805	WDR36	Q8NI36	951 aa	Known RBP	21.29	■■□□□ 1
NECAB3-222	ENST00000607805	JOSD2	Q8TAC2	188 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	SLC20A1	Q8WUM9	679 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805	COL12A1	Q99715	3063 aa		21.29	■■□□□ 1
NECAB3-222	ENST00000607805		J3QKU1	62 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	MMP20	O60882	483 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	PLEK	P08567	350 aa	Predicted RBP	21.28	■■□□□ 1
NECAB3-222	ENST00000607805	TIMP2	P16035	220 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	TSHR	P16473	764 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	CHRNB2	P17787	502 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	ITIH2	P19823	946 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	EIF4A3	P38919	411 aa	Known RBP	21.28	■■□□□ 1
NECAB3-222	ENST00000607805	RPIA	P49247	311 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	HDAC4	P56524	1084 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	FMO1	Q01740	532 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	LY6D	Q14210	128 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	CDO1	Q16878	200 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	LRRC73	Q5JTD7	316 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	RWDD4	Q6NW29	188 aa	Known RBP	21.28	■■□□□ 1
NECAB3-222	ENST00000607805	TTC7B	Q86TV6	843 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	CCDC185	Q8N715	623 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	GPT2	Q8TD30	523 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	GLMN	Q92990	594 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	TBC1D31	Q96DN5	1066 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	CCDC97	Q96F63	343 aa	Predicted RBP	21.28	■■□□□ 1
NECAB3-222	ENST00000607805	CCDC3	Q9BQI4	270 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	21.28	■■□□□ 1	1e-6	■■□□□ 14.2
NECAB3-222	ENST00000607805	TTYH3	Q9C0H2	523 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	DKK3	Q9UBP4	350 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	HPCAL4	Q9UM19	191 aa		21.28	■■□□□ 1
NECAB3-222	ENST00000607805	ZFC3H1	O60293	1989 aa	Known RBP	21.28	■■□□□ 1
NECAB3-222	ENST00000607805	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	21.27	■■□□□ 1
NECAB3-222	ENST00000607805	RAMP2	O60895	175 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	TM7SF2	O76062	418 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	TMCC1	O94876	653 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	ANXA6	P08133	673 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	CELA2B	P08218	269 aa	Predicted RBP	21.27	■■□□□ 1
NECAB3-222	ENST00000607805	ERCC5	P28715	1186 aa	Predicted RBP	21.27	■■□□□ 1
NECAB3-222	ENST00000607805	SDC4	P31431	198 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	PTP4A2	Q12974	167 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	CLN3	Q13286	438 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	DPCR1	Q3MIW9	517 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	INO80D	Q53TQ3	878 aa	Predicted RBP	21.27	■■□□□ 1
NECAB3-222	ENST00000607805	HSP90AA4P	Q58FG1	418 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	NTAN1	Q96AB6	310 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	LIN37	Q96GY3	246 aa	Predicted RBP	21.27	■■□□□ 1
NECAB3-222	ENST00000607805	EPAS1	Q99814	870 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	SLC13A1	Q9BZW2	595 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	KLC2	Q9H0B6	622 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	GAN	Q9H2C0	597 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	PADI4	Q9UM07	663 aa		21.27	■■□□□ 1
NECAB3-222	ENST00000607805	CCDC187	A0A096LP49	1063 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	GJB6	O95452	261 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	C6	P13671	934 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	GSC	P56915	257 aa	Predicted RBP	21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	CDR2	Q01850	454 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	PPARD	Q03181	441 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	KLHL40	Q2TBA0	621 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	TMEM52B	Q4KMG9	183 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	ARL14	Q8N4G2	192 aa		21.26	■□□□□ 0.99
NECAB3-222	ENST00000607805	CASKIN2	Q8WXE0	1202 aa		21.26	■□□□□ 0.99

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