RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
CTSA-210ENST00000606000 SLC17A9Q9BYT1 436 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 DEF6Q9H4E7 631 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 CTTNBP2NLQ9P2B4 639 aa12.44□□□□□ -0.42
CTSA-210ENST00000606000 SHROOM3Q8TF72 1996 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 SPTBN2O15020 2390 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 MYO1FO00160 1098 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 MFSD11O43934 449 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 MMP20O60882 483 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 MAP3K6O95382 1288 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 ITGAVP06756 1048 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 IL4RP24394 825 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 ARSEP51690 589 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 CDH6P55285 790 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 CLDN6P56747 220 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 SLC10A7Q0GE19 358 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 DNAJC3Q13217 504 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 KRT81Q14533 505 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 BOLA3Q53S33 107 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 TMCO3Q6UWJ1 677 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 PTAR1Q7Z6K3 402 aaPredicted RBP12.43□□□□□ -0.42
CTSA-210ENST00000606000 ABI3BPQ7Z7G0 1075 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 TTC7BQ86TV6 843 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 CAMK1DQ8IU85 385 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 PGBD5Q8N414 524 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 LRRN4Q8WUT4 740 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 TEKT4Q8WW24 435 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 CTNNBL1Q8WYA6 563 aaPredicted RBP12.43□□□□□ -0.42
CTSA-210ENST00000606000 RAB7BQ96AH8 199 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 CINPQ9BW66 212 aaPredicted RBP12.43□□□□□ -0.42
CTSA-210ENST00000606000 C1QTNF2Q9BXJ5 285 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 ERVMER34-1Q9H9K5 563 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 UCKL1Q9NWZ5 548 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 IPO11Q9UI26 975 aaKnown RBP12.43□□□□□ -0.42
CTSA-210ENST00000606000 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
CTSA-210ENST00000606000 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 SSU72P8A0A1W2PR75 194 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 A6NNZ2 444 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 TSPAN6O43657 245 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 AKR1B10O60218 316 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 DFNA5O60443 496 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 PROSCO94903 275 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 PEX11BO96011 259 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 H2AFZP0C0S5 128 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 IGFALSP35858 605 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 RXRGP48443 463 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 RAD51Q06609 339 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 IL10RBQ08334 325 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 TBX2Q13207 712 aaPredicted RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 DPYSL3Q14195 570 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 LBRQ14739 615 aaKnown RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 UNQ6494/PRO21346Q6UXR6 183 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 KYAT3Q6YP21 454 aaKnown RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 Q6ZSR6 202 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 H2AFVQ71UI9 128 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 SRLQ86TD4 932 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 GATA6Q92908 595 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 CPEB1Q9BZB8 566 aaKnown RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 NHEJ1Q9H9Q4 299 aaPredicted RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 PCDH12Q9NPG4 1184 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 MBNL1Q9NR56 388 aaKnown RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 GPR27Q9NS67 375 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 DKK3Q9UBP4 350 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 FTSJ1Q9UET6 329 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 APOBEC2Q9Y235 224 aaKnown RBP12.42□□□□□ -0.42
CTSA-210ENST00000606000 PLXNB3Q9ULL4 1909 aa12.42□□□□□ -0.42
CTSA-210ENST00000606000 SPEGQ15772 3267 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 TSPAN11A1L157 253 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 FFAR2O15552 330 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 TNFSF14O43557 240 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 MAFKO60675 156 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 ZNF135P52742 658 aaPredicted RBP12.41□□□□□ -0.42
CTSA-210ENST00000606000 MAXP61244 160 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 OVGP1Q12889 678 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 SGCGQ13326 291 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 FZD2Q14332 565 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 MESDQ14696 234 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 TMCO4Q5TGY1 634 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 NCBP2-AS2Q69YL0 99 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 NYAP1Q6ZVC0 841 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 OXR1Q8N573 874 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
CTSA-210ENST00000606000 PCDH19Q8TAB3 1148 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 FAM71BQ8TC56 605 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 CXorf40AQ8TE69 158 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
CTSA-210ENST00000606000 CDC6Q99741 560 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 RBSNQ9H1K0 784 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 SUV39H2Q9H5I1 410 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 ZNHIT6Q9NWK9 470 aaKnown RBP12.41□□□□□ -0.42
CTSA-210ENST00000606000 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
CTSA-210ENST00000606000 PNMA8BQ9ULN7 279 aaPredicted RBP12.41□□□□□ -0.42
CTSA-210ENST00000606000 NEUROG3Q9Y4Z2 214 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms