RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 THP07101 528 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MSH3P20585 1137 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF484Q5JVG2 852 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 PPM1LQ5SGD2 360 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 RNF180Q86T96 592 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 SCUBE3Q8IX30 993 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 MCOLN2Q8IZK6 566 aa8.77□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF717Q9BY31 904 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-216ENST00000602557 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 H3BNX3 289 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CHRNGP07510 517 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PRKACAP17612 351 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PSMD4P55036 377 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SYCE2Q6PIF2 218 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PLET1Q6UQ28 207 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 POLR1DQ9Y2S0 133 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SQORQ9Y6N5 450 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TPP1O14773 563 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PIGNO95427 931 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SERPINA1P01009 418 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 RHOCP08134 193 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 C3orf67Q6ZVT6 689 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CCDC185Q8N715 623 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TRPV1Q8NER1 839 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 DIRAS2Q96HU8 199 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SLC25A23Q9BV35 468 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 RAB26Q9ULW5 256 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 MROH2AA6NES4 1674 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SH3D21A4FU49 640 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CPS1P31327 1500 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 MAPK9P45984 424 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 RPL14P50914 215 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 XIAPP98170 497 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 ZCCHC8Q6NZY4 707 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CACUL1Q86Y37 369 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 MRPS31Q92665 395 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 MECRQ9BV79 373 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PCDHGC5Q9Y5F6 944 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 H3BMM5 538 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 NR2C2P49116 596 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CBWD3Q5JTY5 395 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CBWD5Q5RIA9 395 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 ADHFE1Q8IWW8 467 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CDK5RAP1Q96SZ6 601 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 COLEC11Q9BWP8 271 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PRKD3O94806 890 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CSF1RP07333 972 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 EIF2S3LQ2VIR3 472 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TMEM132CQ8N3T6 1108 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TRIT1Q9H3H1 467 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 WDR6Q9NNW5 1121 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 DIDO1Q9BTC0 2240 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 EGFRP00533 1210 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 S100A2P29034 98 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 RPL6Q02878 288 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SQLEQ14534 574 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 KCTD8Q6ZWB6 473 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 ECHDC2Q86YB7 292 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 FAM126BQ8IXS8 530 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 OSMRQ99650 979 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 IL1R1P14778 569 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 EPHB3P54753 998 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 BST1Q10588 318 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 FSTL1Q12841 308 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 RASAL3Q86YV0 1011 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 DPY30Q9C005 99 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CIPCQ9C0C6 399 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 STN1Q9H668 368 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 RBM22Q9NW64 420 aaKnown RBP eCLIP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 GNEQ9Y223 722 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 LRRC14BA6NHZ5 514 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PCDH8O95206 1070 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TUBP50607 506 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PTPN5P54829 565 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PPATQ06203 517 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SNAP47Q5SQN1 464 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CLN6Q9NWW5 311 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 EIF3KQ9UBQ5 218 aaKnown RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 ITGA11Q9UKX5 1188 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 BARX2Q9UMQ3 279 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 FADS3Q9Y5Q0 445 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 SRRM3A6NNA2 597 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PDLIM1O00151 329 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TRIM38O00635 465 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TEX28O15482 410 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TBX1O43435 398 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 ITPK1Q13572 414 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 LCN1P1Q5VSP4 162 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PDPRQ8NCN5 879 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CYP2W1Q8TAV3 490 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 HTR3CQ8WXA8 447 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CAB39LQ9H9S4 337 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 PXMP2Q9NR77 195 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 EGFL7Q9UHF1 273 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 TSPAN16Q9UKR8 245 aa8.76□□□□□ -1.01
CSMD1-216ENST00000602557 CCR4P51679 360 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 SLC22A16Q86VW1 577 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms