RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 RFTN1Q14699 578 aaPredicted RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 POLD3Q15054 466 aaPredicted RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 BBS9Q3SYG4 887 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 PREPLQ4J6C6 727 aaPredicted RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 GRAMD4Q6IC98 578 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 NAPEPLDQ6IQ20 393 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 KDM7AQ6ZMT4 941 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 TAOK1Q7L7X3 1001 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 WDR5BQ86VZ2 330 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 LONP2Q86WA8 852 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 CAMKK1Q8N5S9 505 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 NAT16Q8N8M0 369 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 IL17RCQ8NAC3 791 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 FBXO36Q8NEA4 188 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 OR2W6PQ8NHA6 318 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 IGSF8Q969P0 613 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 XPO6Q96QU8 1125 aaKnown RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 CYTH2Q99418 400 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 EBNA1BP2Q99848 306 aaKnown RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 ACSS3Q9H6R3 686 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 CNOT10Q9H9A5 744 aaKnown RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 VPS45Q9NRW7 570 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 POLR3BQ9NW08 1133 aaPredicted RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 MPP6Q9NZW5 540 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 MMP17Q9ULZ9 603 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 TBC1D30Q9Y2I9 924 aa11.69□□□□□ -0.54
ZNF548-211ENST00000600927 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
ZNF548-211ENST00000600927 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 TYW5A2RUC4 315 aaKnown RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 PRRT4C9JH25 899 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 DFFAO00273 331 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 ZBTB24O43167 697 aaPredicted RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 ADAM23O75077 832 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 FAM155BO75949 473 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 LMNAP02545 664 aaKnown RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 HNRNPLP14866 589 aaKnown RBP eCLIP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 PSMB4P28070 264 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 HOXD9P28356 352 aaPredicted RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 OR1E1P30953 314 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 CD68P34810 354 aaPredicted RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 ELK3P41970 407 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 SEC13P55735 322 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 GPX6P59796 221 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 MPP3Q13368 585 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 ALFQ53S48 1182 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 MARC1Q5VT66 337 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 STEAP4Q687X5 459 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 B4GALNT4Q76KP1 1039 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 ZNF534Q76KX8 674 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 RASSF3Q86WH2 238 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 LGI2Q8N0V4 545 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 BBS5Q8N3I7 341 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 PDCD7Q8N8D1 485 aaKnown RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 TTC17Q96AE7 1141 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 CELF6Q96J87 481 aaKnown RBP11.68□□□□□ -0.54
ZNF548-211ENST00000600927 PWWP2AQ96N64 755 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 SLC25A51Q9H1U9 297 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 VPS37BQ9H9H4 285 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 GLOD4Q9HC38 313 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 CD248Q9HCU0 757 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 CASS4Q9NQ75 786 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 EURLQ9NYK6 297 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 PLK2Q9NYY3 685 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 BFARQ9NZS9 450 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 SEPT10Q9P0V9 454 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 EBF1Q9UH73 591 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 RABGEF1Q9UJ41 708 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 CLEC4EQ9ULY5 219 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 GPR179Q6PRD1 2367 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 CFAP54Q96N23 3096 aa11.68□□□□□ -0.54
ZNF548-211ENST00000600927 DOCK4Q8N1I0 1966 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.67□□□□□ -0.54
ZNF548-211ENST00000600927 EXOC1LA0A1B0GW35 172 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 GOLGA8MH3BSY2 632 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
ZNF548-211ENST00000600927 PRAMEF11O60813 436 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 NEBLO76041 1014 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 CNTN5O94779 1100 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 ALDH1A2O94788 518 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 PEX11BO96011 259 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 NR1D1P20393 614 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 PRKCHP24723 683 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 SLC6A4P31645 630 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 CNR2P34972 360 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 FNTBP49356 437 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 DGKGP49619 791 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 SGSHP51688 502 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 SLC18A1P54219 525 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 GEMIN4P57678 1058 aaKnown RBP11.67□□□□□ -0.54
ZNF548-211ENST00000600927 CDH17Q12864 832 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 ZBTB17Q13105 803 aa11.67□□□□□ -0.54
ZNF548-211ENST00000600927 ZNF177Q13360 481 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms