RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CAMK2GQ13555 558 aaPredicted RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 DHX34Q14147 1143 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 ELAVL3Q14576 367 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF235Q14590 738 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 GRM3Q14832 879 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 EOGTQ5NDL2 527 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 CCDC137Q6PK04 289 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 SERPINA13PQ6UXR4 307 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 LINGO4Q6UY18 593 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 CHPFQ8IZ52 775 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 FAM71DQ8N9W8 422 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 OR2AP1Q8NGE2 309 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 CCHCR1Q8TD31 782 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 PTPRN2Q92932 1015 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 LRIG1Q96JA1 1093 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 RPL10LQ96L21 214 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 PPP1R2P1Q96PQ5 205 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 TMEM121Q9BTD3 319 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 CINPQ9BW66 212 aaPredicted RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 CPEB1Q9BZB8 566 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 POLR1EQ9GZS1 481 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 PCDH9Q9HC56 1237 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 CD248Q9HCU0 757 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 LHX3Q9UBR4 397 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 STON1Q9Y6Q2 735 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 LNP1A1A4G5 178 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 C4orf47A7E2U8 309 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 K7ERQ8 282 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ADAM23O75077 832 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 IGSF6O95976 241 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 GAS8O95995 478 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 HLA-DQB2P05538 268 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 GDF10P55107 478 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 RHOAP61586 193 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 AP1S1P61966 158 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 SNX1Q13596 522 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 FNDC3BQ53EP0 1204 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 CARD16Q5EG05 197 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ANKRD20A2Q5SQ80 823 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 C9orf64Q5T6V5 341 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ANKRD20A1Q5TYW2 823 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 EMC10Q5UCC4 262 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ANKRD20A3Q5VUR7 823 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ITPRIPL1Q6GPH6 555 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 SDE2Q6IQ49 451 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 SYT13Q7L8C5 426 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 MAATS1Q7Z4T9 603 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF567Q8N184 647 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 PGBD5Q8N414 524 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 MMGT1Q8N4V1 131 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 CAMKK1Q8N5S9 505 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 TSEN2Q8NCE0 465 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 OR2A12Q8NGT7 310 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 RPLP0P6Q8NHW5 317 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ARRDC2Q8TBH0 407 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 TADA1Q96BN2 335 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 CCDC114Q96M63 670 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 GDAP1L1Q96MZ0 367 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 FCRL5Q96RD9 977 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 NUDCD1Q96RS6 583 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 TUBGCP5Q96RT8 1024 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 EDEM2Q9BV94 578 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 DDX47Q9H0S4 455 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 SLC25A51Q9H1U9 297 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 VPS45Q9NRW7 570 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 CACNA2D2Q9NY47 1150 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 PAK5Q9P286 719 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 MMP17Q9ULZ9 603 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 FCF1Q9Y324 198 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ACTL7AQ9Y615 435 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 ADAMTS20P59510 1910 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 PTPRBP23467 1997 aa11.79□□□□□ -0.52
CHMP2A-207ENST00000600804 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 TTC34A8MYJ7 566 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 PATE3B3GLJ2 98 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 SGK1O00141 431 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 MUSKO15146 869 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 NEBLO76041 1014 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 ECEL1O95672 775 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 POP4O95707 220 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 BCKDHBP21953 392 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 PRKCHP24723 683 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 CD68P34810 354 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 TIE1P35590 1138 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 ACTN2P35609 894 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 PTGIRP43119 386 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 KCNJ1P48048 391 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 PARP6Q2NL67 630 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 C2orf27AQ580R0 203 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 UNQ6494/PRO21346Q6UXR6 183 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 CTAGE4Q8IX94 777 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms