RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CTSEP14091 401 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 BMP6P22004 513 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 GRNP28799 593 aaKnown RBP17.88■□□□□ 0.45
SSBP4-207ENST00000600244 GTF2H1P32780 548 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 CLCN6P51797 869 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 KRT83P78385 493 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 B4GALNT1Q00973 533 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 SEPT6Q14141 434 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 ALG11Q2TAA5 492 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 COBLL1Q53SF7 1204 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 GKN2Q86XP6 184 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 HID1Q8IV36 788 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 EFCAB3Q8N7B9 438 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 TSACCQ96A04 125 aaPredicted RBP17.88■□□□□ 0.45
SSBP4-207ENST00000600244 CCDC47Q96A33 483 aaKnown RBP17.88■□□□□ 0.45
SSBP4-207ENST00000600244 VPS51Q9UID3 782 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 GGT7Q9UJ14 662 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 B4GAT1O43505 415 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 ABL2P42684 1182 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 TCEA2Q15560 299 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 ARHGAP44Q17R89 818 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 ZNF658Q5TYW1 1059 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-207ENST00000600244 C22orf39Q6P5X5 142 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 FBXL13Q8NEE6 735 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 RPRD1AQ96P16 312 aaPredicted RBP17.87■□□□□ 0.45
SSBP4-207ENST00000600244 ZSWIM1Q9BR11 485 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 DDA1Q9BW61 102 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 SPRY4Q9C004 299 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 RDH14Q9HBH5 336 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 MBNL1Q9NR56 388 aaKnown RBP17.87■□□□□ 0.45
SSBP4-207ENST00000600244 LRIT1Q9P2V4 623 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 SLC12A6Q9UHW9 1150 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 TRAF3IP3Q9Y228 551 aa17.87■□□□□ 0.45
SSBP4-207ENST00000600244 SHANK1Q9Y566 2161 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 CPNE6O95741 557 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 TRUB2O95900 331 aaKnown RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 RPL34P49207 117 aaKnown RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 PITX1P78337 314 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 CRTC2Q53ET0 693 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 CCDC183Q5T5S1 534 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 PIM3Q86V86 326 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 VPS36Q86VN1 386 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 SFTPA2Q8IWL1 248 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 UBR7Q8N806 425 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 RCBTB1Q8NDN9 531 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 CPT1CQ8TCG5 803 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 RAB7BQ96AH8 199 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 HEPHQ9BQS7 1158 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 C2orf49Q9BVC5 232 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 GTPBP4Q9BZE4 634 aaKnown RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 GPN2Q9H9Y4 310 aaPredicted RBP17.86■□□□□ 0.45
SSBP4-207ENST00000600244 DONSONQ9NYP3 566 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 PILRAQ9UKJ1 303 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 ITM2BQ9Y287 266 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 KCNMB2Q9Y691 235 aa17.86■□□□□ 0.45
SSBP4-207ENST00000600244 LOC101059948A0A1B0GTJ6 334 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 TTLL8A6PVC2 850 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 CLDN11O75508 207 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 RASGRP1O95267 797 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 KRT13P13646 458 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 PEX5P50542 639 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 CUL2Q13617 745 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 AUHQ13825 339 aaKnown RBP17.85■□□□□ 0.45
SSBP4-207ENST00000600244 HLTFQ14527 1009 aaKnown RBP eCLIP17.85■□□□□ 0.45
SSBP4-207ENST00000600244 CNGA2Q16280 664 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 SKOR2Q2VWA4 1001 aaPredicted RBP17.85■□□□□ 0.45
SSBP4-207ENST00000600244 C5orf22Q49AR2 442 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 LINGO4Q6UY18 593 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 ASB18Q6ZVZ8 466 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 CCDC13Q8IYE1 715 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 GUF1Q8N442 669 aaKnown RBP17.85■□□□□ 0.45
SSBP4-207ENST00000600244 TP53I13Q8NBR0 393 aaPredicted RBP17.85■□□□□ 0.45
SSBP4-207ENST00000600244 FAM149B1Q96BN6 582 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 HAPLN3Q96S86 360 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 RBM15Q96T37 977 aaKnown RBP eCLIP17.85■□□□□ 0.45
SSBP4-207ENST00000600244 MUC3BQ9H195 1237 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 CASS4Q9NQ75 786 aa17.85■□□□□ 0.45
SSBP4-207ENST00000600244 IGHV5-10-1A0A0J9YXX1 117 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 NUDT21O43809 227 aaKnown RBP17.84■□□□□ 0.45
SSBP4-207ENST00000600244 ENDOD1O94919 500 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 ARHGEF7Q14155 803 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 NFIL3Q16649 462 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 C14orf28Q4W4Y0 310 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 FAM186BQ8IYM0 893 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 ART4Q93070 314 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 NUDT22Q9BRQ3 303 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 EFHD1Q9BUP0 239 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 ASPSCR1Q9BZE9 553 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 VANGL2Q9ULK5 521 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 MAP4K5Q9Y4K4 846 aa17.84■□□□□ 0.45
SSBP4-207ENST00000600244 C16orf96A6NNT2 1141 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 MKRN2OSH3BPM6 223 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 NEMP1O14524 444 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 AREL1O15033 823 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 SART1O43290 800 aaKnown RBP17.83■□□□□ 0.44
SSBP4-207ENST00000600244 CALUO43852 315 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-207ENST00000600244 NR2F2P24468 414 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms