RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 SLC25A24Q6NUK1 477 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 POTEHQ6S545 545 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 EXOC3L1Q86VI1 746 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 UPF1Q92900 1129 aaKnown RBP eCLIP20.61■□□□□ 0.891e-10■■■■■ 36.9
UPF1-207ENST00000599848 SLC27A5Q9Y2P5 690 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 NR2E1Q9Y466 385 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 FPGTO14772 594 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 MRASO14807 208 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 DSG1Q02413 1049 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 NR1D2Q14995 579 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 C3orf67Q6ZVT6 689 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 TAF8Q7Z7C8 310 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 ZNF605Q86T29 641 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 TSTD1Q8NFU3 115 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 NELL1Q92832 810 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 LRRC46Q96FV0 321 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 PDP2Q9P2J9 529 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 WBP4O75554 376 aaKnown RBP20.61■□□□□ 0.89
UPF1-207ENST00000599848 KPNB1Q14974 876 aaKnown RBP20.61■□□□□ 0.89
UPF1-207ENST00000599848 C1orf186Q6ZWK4 172 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 ZHX1-C8orf76Q96EF9 292 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 TPD52L3Q96J77 140 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 POMKQ9H5K3 350 aa20.61■□□□□ 0.89
UPF1-207ENST00000599848 DDX6P26196 483 aaKnown RBP eCLIP20.6■□□□□ 0.89
UPF1-207ENST00000599848 ABL2P42684 1182 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 DMTNQ08495 405 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 XKR6Q5GH73 641 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 ZBTB49Q6ZSB9 765 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 RNF44Q7L0R7 432 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 ADHFE1Q8IWW8 467 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 SAMD14Q8IZD0 417 aaPredicted RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 MORF4L1Q9UBU8 362 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 SLC12A4Q9UP95 1085 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 GSTK1Q9Y2Q3 226 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 TAF4O00268 1085 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 RPL4P36578 427 aaKnown RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 SLC12A3P55017 1021 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 IL5RAQ01344 420 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 UBXN2BQ14CS0 331 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 CERCAMQ5T4B2 595 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 RIPOR1Q6ZS17 1223 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 ARNTL2Q8WYA1 636 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 ZBTB45Q96K62 511 aaPredicted RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 APLP1P51693 650 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 CDC42P60953 191 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 MRPS35P82673 323 aaKnown RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 ESRP1Q6NXG1 681 aaKnown RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 CENPIQ92674 756 aaPredicted RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 PLD4Q96BZ4 506 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 LIMD1Q9UGP4 676 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 IFNGP01579 166 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 TSPAN19P0C672 248 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 PIM1P11309 404 aaPredicted RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 SP100P23497 879 aaPredicted RBP20.6■□□□□ 0.89
UPF1-207ENST00000599848 PTSQ03393 145 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 GPAT3Q53EU6 434 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 TAPT1Q6NXT6 567 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 ZFP1Q6P2D0 407 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 ADGRA1Q86SQ6 560 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 LPPQ93052 612 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 RAB11FIP5Q9BXF6 653 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 PCBD2Q9H0N5 130 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 SMURF2Q9HAU4 748 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 SATB2Q9UPW6 733 aa20.6■□□□□ 0.89
UPF1-207ENST00000599848 PSMD8P48556 350 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 TPGS2Q68CL5 300 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 CERS6Q6ZMG9 384 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 OTOP2Q7RTS6 562 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 OR14C36Q8NHC7 312 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 RDH11Q8TC12 318 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 HNRNPLLQ8WVV9 542 aaKnown RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 SAMD11Q96NU1 681 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 NEUROD4Q9HD90 331 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 ETNK2Q9NVF9 386 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 TMEM191CA6NGB0 347 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 WARSP23381 471 aaKnown RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 ATP5F1P24539 256 aaPredicted RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 PRKAG1P54619 331 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 CAP1Q01518 475 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 NDUFAF6Q330K2 333 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 ARHGEF19Q8IW93 802 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 DENND1AQ8TEH3 1009 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 KCNMB3Q9NPA1 279 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 IMP3Q9NV31 184 aaKnown RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 NDRG2Q9UN36 371 aaKnown RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 KLHL41O60662 606 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 OR2W6PQ8NHA6 318 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 RCOR3Q9P2K3 495 aaPredicted RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 A8MX80 341 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 RASGRP1O95267 797 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 CXCR3P49682 368 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 TRMT5Q32P41 509 aaKnown RBP20.59■□□□□ 0.89
UPF1-207ENST00000599848 KDM7AQ6ZMT4 941 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 POLNQ7Z5Q5 900 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 TMEM120AQ9BXJ8 343 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 INSL6Q9Y581 213 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 PTPRJQ12913 1337 aa20.59■□□□□ 0.89
UPF1-207ENST00000599848 A0A087X0B3 334 aa20.58■□□□□ 0.89
UPF1-207ENST00000599848 USP27XA6NNY8 438 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms