RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ZBTB17Q13105 803 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 SIM2Q14190 667 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 NYAP1Q6ZVC0 841 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 LPCAT2Q7L5N7 544 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 NDUFAF2Q8N183 169 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 OR2T34Q8NGX1 318 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 OR6K2Q8NGY2 324 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 ARRDC2Q8TBH0 407 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 RTP4Q96DX8 246 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 IMP4Q96G21 291 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 ZNF419Q96HQ0 510 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 KLHL32Q96NJ5 620 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 NEUROG2Q9H2A3 272 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 USP29Q9HBJ7 922 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 GLOD4Q9HC38 313 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 PREBQ9HCU5 417 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 SEPT10Q9P0V9 454 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 FEZ2Q9UHY8 353 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 RAB23Q9ULC3 237 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 GOLGA6L10A0A0M3HER8 536 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 TCRBV7S2A1N4TA0A589 114 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 PROB1E7EW31 1015 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 TRAFD1O14545 582 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 KCNN4O15554 427 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 TSPAN6O43657 245 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 GCATO75600 419 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 SEMA4FO95754 770 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 ADRB3P13945 408 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 ELP6Q0PNE2 266 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 OASLQ15646 514 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 PIP5KL1Q5T9C9 394 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 AGBL4Q5VU57 503 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 C4orf22Q6V702 233 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 PID1Q7Z2X4 250 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 CACUL1Q86Y37 369 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 CAMK1DQ8IU85 385 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 RLN3Q8WXF3 142 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 ARRDC3Q96B67 414 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 ERLEC1Q96DZ1 483 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 AGAP3Q96P47 875 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 FCRL5Q96RD9 977 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 KLHL8Q9P2G9 620 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 DNPEPQ9ULA0 475 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 R3HDM2Q9Y2K5 976 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
SHKBP1-219ENST00000599575 EPOP01588 193 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 XPAP23025 273 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 CASQ1P31415 396 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 HOXD12P35452 270 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ACTN2P35609 894 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 CCR5P51681 352 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ADPRHP54922 357 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 MAXP61244 160 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 RPL6Q02878 288 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 SIX1Q15475 284 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 UGP2Q16851 508 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 P3H1Q32P28 736 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 PLK5Q496M5 336 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 SYCP2LQ5T4T6 812 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ARMC12Q5T9G4 340 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 PMS2CLQ68D20 193 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 PARS2Q7L3T8 475 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 TTC7BQ86TV6 843 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ZNF567Q8N184 647 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 OR14C36Q8NHC7 312 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 TADA1Q96BN2 335 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 LRRC45Q96CN5 670 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ADGRE3Q9BY15 652 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 SERGEFQ9UGK8 458 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 MBD1Q9UIS9 605 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 PHTF1Q9UMS5 762 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 ZNF148Q9UQR1 794 aa16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 AAR2Q9Y312 384 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-219ENST00000599575 GOLGA6CA6NDK9 693 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 C10orf142B7Z368 130 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 AREL1O15033 823 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 FZD6O60353 706 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 ANXA9O76027 345 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 GOLGA6DP0CG33 693 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 GKP32189 559 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 ACSL1P33121 698 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 CYP1B1Q16678 543 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 WDR45BQ5MNZ6 344 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 ANKRD20A2Q5SQ80 823 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 ANKRD20A1Q5TYW2 823 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 ANKRD20A3Q5VUR7 823 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 LAIR1Q6GTX8 287 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 KIAA1161Q6NSJ0 714 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 TRIM69Q86WT6 500 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 COG1Q8WTW3 980 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 LRRN4Q8WUT4 740 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 FEM1CQ96JP0 617 aa16.7■□□□□ 0.26
SHKBP1-219ENST00000599575 SRPK1Q96SB4 655 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms