RNA–Protein interactions for RNA: ENST00000598343.5

SARS2-208, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene SARS2, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-208ENST00000598343 AGBL4Q5VU57 503 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 PAPD7Q5XG87 772 aaKnown RBP18.1■□□□□ 0.49
SARS2-208ENST00000598343 BRAT1Q6PJG6 821 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 PRR23BQ6ZRT6 265 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 LPCAT2Q7L5N7 544 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 PID1Q7Z2X4 250 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 ARRDC2Q8TBH0 407 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 COG1Q8WTW3 980 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 FAM131CQ96AQ9 280 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 MS4A14Q96JA4 679 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 GPR174Q9BXC1 333 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 GLOD4Q9HC38 313 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 DKK3Q9UBP4 350 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 RAB23Q9ULC3 237 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 TTC7AQ9ULT0 858 aaPredicted RBP18.1■□□□□ 0.49
SARS2-208ENST00000598343 PCDHGC4Q9Y5F7 938 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 SAR1BQ9Y6B6 198 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 EML5Q05BV3 1969 aa18.1■□□□□ 0.49
SARS2-208ENST00000598343 CFAP69A5D8W1 941 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 LRRC72A6NJI9 287 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 RHOBTB1O94844 696 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 CA4P22748 312 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 XPAP23025 273 aaPredicted RBP18.09■□□□□ 0.49
SARS2-208ENST00000598343 CASQ1P31415 396 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 NBL1P41271 181 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 ADPRHP54922 357 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 NIPAL4Q0D2K0 466 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 SNX1Q13596 522 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
SARS2-208ENST00000598343 CCNG2Q16589 344 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 PLK5Q496M5 336 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 ZNF567Q8N184 647 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 PDCD6IPQ8WUM4 868 aaKnown RBP18.09■□□□□ 0.49
SARS2-208ENST00000598343 RAB7BQ96AH8 199 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 ZC3H10Q96K80 434 aaKnown RBP18.09■□□□□ 0.49
SARS2-208ENST00000598343 NSMCE3Q96MG7 304 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 DUSP15Q9H1R2 295 aaPredicted RBP18.09■□□□□ 0.49
SARS2-208ENST00000598343 SLC25A51Q9H1U9 297 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 EPC1Q9H2F5 836 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 KDM4CQ9H3R0 1056 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 SEMA4AQ9H3S1 761 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 USP29Q9HBJ7 922 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 HOMER3Q9NSC5 361 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 RAPGEFL1Q9UHV5 662 aa18.09■□□□□ 0.49
SARS2-208ENST00000598343 ARIH1Q9Y4X5 557 aaPredicted RBP18.09■□□□□ 0.49
SARS2-208ENST00000598343 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 A0A1W2PQ67 120 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 TSPAN11A1L157 253 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 FAM47DPA6NHR8 397 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 TRAFD1O14545 582 aaPredicted RBP18.08■□□□□ 0.48
SARS2-208ENST00000598343 ZNF185O15231 689 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 PLRG1O43660 514 aaKnown RBP18.08■□□□□ 0.48
SARS2-208ENST00000598343 NFKB1P19838 968 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 CD86P42081 329 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.48
SARS2-208ENST00000598343 SPDYCQ5MJ68 293 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 ITPRIPL1Q6GPH6 555 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 SYT10Q6XYQ8 523 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 TMEFF1Q8IYR6 380 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 FAM71DQ8N9W8 422 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 CADM4Q8NFZ8 388 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 OR2T34Q8NGX1 318 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 ACTRT1Q8TDG2 376 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 NKD2Q969F2 451 aaPredicted RBP18.08■□□□□ 0.48
SARS2-208ENST00000598343 ECHDC3Q96DC8 303 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 IMP4Q96G21 291 aaKnown RBP18.08■□□□□ 0.48
SARS2-208ENST00000598343 C16orf45Q96MC5 204 aaPredicted RBP18.08■□□□□ 0.48
SARS2-208ENST00000598343 RBM15Q96T37 977 aaKnown RBP eCLIP18.08■□□□□ 0.487e-7■■■■■ 33.6
SARS2-208ENST00000598343 ZNF148Q9UQR1 794 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 RAI2Q9Y5P3 530 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 PLXND1Q9Y4D7 1925 aa18.08■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3DA0A087WVF3 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3IA0A087WXS9 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3EA0A087X179 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3KA0A087X1G2 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3FA6NER0 549 aaPredicted RBP18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3LB9A6J9 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 HTRA2O43464 458 aaPredicted RBP18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3HP0C7X1 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 STIP1P31948 543 aaKnown RBP18.07■□□□□ 0.48
SARS2-208ENST00000598343 CD68P34810 354 aaPredicted RBP18.07■□□□□ 0.48
SARS2-208ENST00000598343 SUOXP51687 545 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 SKOR1P84550 965 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TRAF2Q12933 501 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 OASLQ15646 514 aaKnown RBP18.07■□□□□ 0.48
SARS2-208ENST00000598343 UGP2Q16851 508 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 ANKRD20A2Q5SQ80 823 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 ARMC12Q5T9G4 340 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 ANKRD20A1Q5TYW2 823 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 ANKRD20A3Q5VUR7 823 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 PMS2CLQ68D20 193 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3GQ6DHY5 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3CQ6IPX1 549 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 NYAP1Q6ZVC0 841 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 TBC1D3Q8IZP1 549 aaPredicted RBP18.07■□□□□ 0.48
SARS2-208ENST00000598343 DEFB119Q8N690 84 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 FOXJ1Q92949 421 aa18.07■□□□□ 0.48
SARS2-208ENST00000598343 SPATA13Q96N96 652 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms