RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 HAUS2Q9NVX0 235 aa13.48□□□□□ -0.25
IRF3-213ENST00000596765 KIAA1522Q9P206 1035 aaPredicted RBP13.48□□□□□ -0.25
IRF3-213ENST00000596765 ERVW-1Q9UQF0 538 aa13.48□□□□□ -0.25
IRF3-213ENST00000596765 PCDH15Q96QU1 1955 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 MED19A0JLT2 244 aaPredicted RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 GOLGA6CA6NDK9 693 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 WASH4PA8MWX3 477 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 TTC34A8MYJ7 566 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 RNF103O00237 685 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 DFFAO00273 331 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 EPHX1P07099 455 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 GOLGA6DP0CG33 693 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 VAV1P15498 845 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 POLR2EP19388 210 aaKnown RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 GARSP41250 739 aaKnown RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 NDST2P52849 883 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 EIF3BP55884 814 aaKnown RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 IFFO1Q0D2I5 559 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 GALNT2Q10471 571 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 CCDC6Q16204 474 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 FNDC3BQ53EP0 1204 aaKnown RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 RNASEH2BQ5TBB1 312 aaKnown RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 LAIR1Q6GTX8 287 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 LRIG3Q6UXM1 1119 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 SERPINA13PQ6UXR4 307 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 CEP68Q76N32 757 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 TFAP2DQ7Z6R9 452 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 NLRP14Q86W24 1093 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 PDIK1LQ8N165 341 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 UCMAQ8WVF2 138 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 SPATA13Q96N96 652 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 TTC25Q96NG3 672 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 PPP1R2P1Q96PQ5 205 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 LGMNQ99538 433 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 PHACTR1Q9C0D0 580 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 C10orf88Q9H8K7 445 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 GOLGA6AQ9NYA3 693 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 KLHL8Q9P2G9 620 aaPredicted RBP13.47□□□□□ -0.25
IRF3-213ENST00000596765 TRHDEQ9UKU6 1024 aa13.47□□□□□ -0.25
IRF3-213ENST00000596765 A0A0D9SEW6 157 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 NPC1O15118 1278 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 EIF3HO15372 352 aaKnown RBP eCLIP13.46□□□□□ -0.25
IRF3-213ENST00000596765 SNAP91O60641 907 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 CLDN11O75508 207 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 ALDH1A2O94788 518 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 MT-CO1P00395 513 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 GLDCP23378 1020 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 HSD17B3P37058 310 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 MAPKAPK2P49137 400 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 CDH4P55283 916 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 PRPSAP1Q14558 356 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 HIF1AQ16665 826 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 USP39Q53GS9 565 aaKnown RBP13.46□□□□□ -0.25
IRF3-213ENST00000596765 C9orf64Q5T6V5 341 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 TTC39BQ5VTQ0 682 aaPredicted RBP13.46□□□□□ -0.25
IRF3-213ENST00000596765 RNF219Q5W0B1 726 aaPredicted RBP13.46□□□□□ -0.25
IRF3-213ENST00000596765 PMS2CLQ68D20 193 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 SDE2Q6IQ49 451 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 PRUNE1Q86TP1 453 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 ZNF354CQ86Y25 554 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 CACUL1Q86Y37 369 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 TMPRSS6Q8IU80 811 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 DEFB119Q8N690 84 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 GLIS1Q8NBF1 620 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 PTPRN2Q92932 1015 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 FAM129BQ96TA1 746 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 CCDC77Q9BR77 488 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 PABPC3Q9H361 631 aaKnown RBP13.46□□□□□ -0.25
IRF3-213ENST00000596765 SMOC1Q9H4F8 434 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 NOL6Q9H6R4 1146 aaKnown RBP13.46□□□□□ -0.25
IRF3-213ENST00000596765 TMEM248Q9NWD8 314 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 USP36Q9P275 1121 aaKnown RBP13.46□□□□□ -0.25
IRF3-213ENST00000596765 BCCIPQ9P287 314 aaKnown RBP eCLIP13.46□□□□□ -0.25
IRF3-213ENST00000596765 MFHAS1Q9Y4C4 1052 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
IRF3-213ENST00000596765 TDRD6O60522 2096 aaKnown RBP13.45□□□□□ -0.26
IRF3-213ENST00000596765 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.45□□□□□ -0.26
IRF3-213ENST00000596765 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 SIN3BO75182 1162 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 SASH3O75995 380 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 EPN2O95208 641 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 CD160O95971 181 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 ATP5BP06576 529 aaKnown RBP13.45□□□□□ -0.26
IRF3-213ENST00000596765 RETP07949 1114 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 CCNCP24863 283 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 PTGER3P43115 390 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 CDK16Q00536 496 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 SPEM2Q0P670 501 aa13.45□□□□□ -0.26
IRF3-213ENST00000596765 ZNF177Q13360 481 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms