RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 AGAP3Q96P47 875 aa23.13■■□□□ 1.29
PNKP-205ENST00000595081 NCDNQ9UBB6 729 aa23.13■■□□□ 1.29
PNKP-205ENST00000595081 AMACRQ9UHK6 382 aa23.13■■□□□ 1.29
PNKP-205ENST00000595081 GMEB2Q9UKD1 530 aa23.13■■□□□ 1.29
PNKP-205ENST00000595081 R3HDM2Q9Y2K5 976 aaKnown RBP23.13■■□□□ 1.29
PNKP-205ENST00000595081 ATP8A1Q9Y2Q0 1164 aa23.13■■□□□ 1.29
PNKP-205ENST00000595081 GON4LQ3T8J9 2241 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3DA0A087WVF3 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3IA0A087WXS9 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3EA0A087X179 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3KA0A087X1G2 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 GOLGA6L9A6NEM1 432 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3FA6NER0 549 aaPredicted RBP23.12■■□□□ 1.29
PNKP-205ENST00000595081 METTL12A8MUP2 240 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 MEI4A8MW99 385 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 HACD1B0YJ81 288 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3LB9A6J9 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 FSBPO95073 299 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 RETP07949 1114 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3HP0C7X1 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 PTPN3P26045 913 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 MAOBP27338 520 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 CXCR5P32302 372 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 PPP2CBP62714 309 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 PPP2CAP67775 309 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 NIPAL4Q0D2K0 466 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 CCDC15Q0P6D6 951 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 XRCC4Q13426 336 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 IHHQ14623 411 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 CCDC6Q16204 474 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 KIAA0895LQ68EN5 471 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3GQ6DHY5 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 ALG1LQ6GMV1 187 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3CQ6IPX1 549 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 CYP2U1Q7Z449 544 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 ADAT2Q7Z6V5 191 aaKnown RBP23.12■■□□□ 1.29
PNKP-205ENST00000595081 SLC13A5Q86YT5 568 aaPredicted RBP23.12■■□□□ 1.29
PNKP-205ENST00000595081 TBC1D3Q8IZP1 549 aaPredicted RBP23.12■■□□□ 1.29
PNKP-205ENST00000595081 SNX19Q92543 992 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 FOXJ1Q92949 421 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 FAM122AQ96E09 287 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 PCED1AQ9H1Q7 454 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 ARRDC1-AS1Q9H2J1 176 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 DKK3Q9UBP4 350 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 ITM2BQ9Y287 266 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.12■■□□□ 1.29
PNKP-205ENST00000595081 JRKLQ9Y4A0 524 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 PCDHGC4Q9Y5F7 938 aa23.12■■□□□ 1.29
PNKP-205ENST00000595081 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.11■■□□□ 1.29
PNKP-205ENST00000595081 TSPAN11A1L157 253 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 TRAFD1O14545 582 aaPredicted RBP23.11■■□□□ 1.29
PNKP-205ENST00000595081 IGHV4-34P06331 123 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 TIMP2P16035 220 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 ITIH2P19823 946 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 PLA2G5P39877 138 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 WASHC5Q12768 1159 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 TRAF2Q12933 501 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 RALGPS1Q5JS13 557 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 CFAP58Q5T655 872 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 TTC7BQ86TV6 843 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 C17orf53Q8N3J3 647 aaPredicted RBP23.11■■□□□ 1.29
PNKP-205ENST00000595081 DCLK2Q8N568 766 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 ARRDC2Q8TBH0 407 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 HTR3CQ8WXA8 447 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 PIGKQ92643 395 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 BIRC7Q96CA5 298 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 HAUS2Q9NVX0 235 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 GGT7Q9UJ14 662 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 FADS3Q9Y5Q0 445 aa23.11■■□□□ 1.29
PNKP-205ENST00000595081 CEP192Q8TEP8 1941 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 BCLAF3A2AJT9 711 aaKnown RBP23.1■■□□□ 1.29
PNKP-205ENST00000595081 SPINT1O43278 529 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 GFRA3O60609 400 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 ATP1A1P05023 1023 aaKnown RBP23.1■■□□□ 1.29
PNKP-205ENST00000595081 RBP3P10745 1247 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 RBL1P28749 1068 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 TEX44Q53QW1 395 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 CDKL3Q8IVW4 592 aaPredicted RBP23.1■■□□□ 1.29
PNKP-205ENST00000595081 RGL4Q8IZJ4 473 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 PAF1Q8N7H5 531 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 PDCD6IPQ8WUM4 868 aaKnown RBP23.1■■□□□ 1.29
PNKP-205ENST00000595081 RUBCNQ92622 972 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 ECHDC3Q96DC8 303 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 HINFPQ9BQA5 517 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 KDM4CQ9H3R0 1056 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 PREBQ9HCU5 417 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 TMEM74BQ9NUR3 256 aa23.1■■□□□ 1.29
PNKP-205ENST00000595081 EP300Q09472 2414 aaPredicted RBP23.09■■□□□ 1.29
PNKP-205ENST00000595081 C10orf142B7Z368 130 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 MTSS1O43312 755 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 CEP104O60308 925 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 SOCS5O75159 536 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 PCDH8O95206 1070 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 PRKCGP05129 697 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 MAT2AP31153 395 aaKnown RBP23.09■■□□□ 1.29
PNKP-205ENST00000595081 MPLP40238 635 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 SYCP2LQ5T4T6 812 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 DARS2Q6PI48 645 aaKnown RBP23.09■■□□□ 1.29
PNKP-205ENST00000595081 BRAT1Q6PJG6 821 aa23.09■■□□□ 1.29
PNKP-205ENST00000595081 TTC13Q8NBP0 860 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms