RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 MAGEB16A2A368 324 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 ZNF821O75541 412 aaPredicted RBP15.33■□□□□ 0.05
VRK3-207ENST00000594092 PIAS1O75925 651 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 EPOP01588 193 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 C1QAP02745 245 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 PSMC3P17980 439 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 DGKGP49619 791 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 ECT2LQ008S8 904 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 SULT2A1Q06520 285 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 CRYMQ14894 314 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 EFTUD2Q15029 972 aaKnown RBP eCLIP15.33■□□□□ 0.053e-6■■□□□ 13.2
VRK3-207ENST00000594092 RASA2Q15283 850 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 TMED2Q15363 201 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 GEN1Q17RS7 908 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 SIRPB2Q5JXA9 342 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 DGKKQ5KSL6 1271 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 MBLAC2Q68D91 279 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 NCEH1Q6PIU2 408 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 YAF2Q8IY57 180 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 TTC17Q96AE7 1141 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 IFT43Q96FT9 208 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 TRIB3Q96RU7 358 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 TM6SF2Q9BZW4 377 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 EURLQ9NYK6 297 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 PSMC3IPQ9P2W1 217 aaPredicted RBP15.33■□□□□ 0.05
VRK3-207ENST00000594092 CD207Q9UJ71 328 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 SLC25A13Q9UJS0 675 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 SOX13Q9UN79 622 aa15.33■□□□□ 0.05
VRK3-207ENST00000594092 USP15Q9Y4E8 981 aaPredicted RBP15.33■□□□□ 0.05
VRK3-207ENST00000594092 FAM237BA0A1B0GVD1 139 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 A6NNZ2 444 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 TULP3O75386 442 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 POLBP06746 335 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 POLR2EP19388 210 aaKnown RBP15.33■□□□□ 0.04
VRK3-207ENST00000594092 HLA-DPA1P20036 260 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 PRKCHP24723 683 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 NR1H3Q13133 447 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 MSLNQ13421 630 aaPredicted RBP15.33■□□□□ 0.04
VRK3-207ENST00000594092 POU6F1Q14863 301 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 KBTBD12Q3ZCT8 623 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 RALGPS1Q5JS13 557 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 PCID2Q5JVF3 399 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 TRMT10BQ6PF06 316 aaKnown RBP15.33■□□□□ 0.04
VRK3-207ENST00000594092 CES3Q6UWW8 571 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 SRLQ86TD4 932 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 TMEM135Q86UB9 458 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 FCRL3Q96P31 734 aaPredicted RBP15.33■□□□□ 0.04
VRK3-207ENST00000594092 KIFC1Q9BW19 673 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 CNOT10Q9H9A5 744 aaKnown RBP15.33■□□□□ 0.04
VRK3-207ENST00000594092 CHRAC1Q9NRG0 131 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 MOCS1Q9NZB8 636 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 SLC27A6Q9Y2P4 619 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 PCDHGC4Q9Y5F7 938 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 RAI2Q9Y5P3 530 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 RPS6KL1Q9Y6S9 549 aa15.33■□□□□ 0.04
VRK3-207ENST00000594092 H3BQ06 376 aaPredicted RBP15.32■□□□□ 0.04
VRK3-207ENST00000594092 ECI2O75521 394 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 USP1O94782 785 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 ALDH1A2O94788 518 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 NDST3O95803 873 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 MSH2P43246 934 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 SLC6A11P48066 632 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 CSNK1DP48730 415 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 AP1S1P61966 158 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 GLIPR1L2Q4G1C9 344 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 ANKRD20A4Q4UJ75 823 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 SPANXN3Q5MJ09 141 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 CYS1Q717R9 158 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 MYLIPQ8WY64 445 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 ISG20Q96AZ6 181 aaKnown RBP15.32■□□□□ 0.04
VRK3-207ENST00000594092 ZNF669Q96BR6 464 aaPredicted RBP15.32■□□□□ 0.04
VRK3-207ENST00000594092 PAFAH2Q99487 392 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 RPP25Q9BUL9 199 aaKnown RBP15.32■□□□□ 0.04
VRK3-207ENST00000594092 TDRD1Q9BXT4 1180 aaKnown RBP15.32■□□□□ 0.04
VRK3-207ENST00000594092 CAPS2Q9BXY5 557 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 EPS15L1Q9UBC2 864 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 SLCO3A1Q9UIG8 710 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 CHKBQ9Y259 395 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 ARIH1Q9Y4X5 557 aaPredicted RBP15.32■□□□□ 0.04
VRK3-207ENST00000594092 EYSQ5T1H1 3165 aa15.32■□□□□ 0.04
VRK3-207ENST00000594092 PRLP01236 227 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 FGF1P05230 155 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 MESP2Q0VG99 397 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 TRAF2Q12933 501 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 RUNX3Q13761 415 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 GALNT3Q14435 633 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 C22orf39Q6P5X5 142 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 PKN3Q6P5Z2 889 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 EXOC3L1Q86VI1 746 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 UNC5BQ8IZJ1 945 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 CYP4X1Q8N118 509 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 CPA6Q8N4T0 437 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 PPHLN1Q8NEY8 458 aaKnown RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 WFIKKN2Q8TEU8 576 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 MRRFQ96E11 262 aaKnown RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 MFSD3Q96ES6 412 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 ZNF778Q96MU6 729 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 DHRS4Q9BTZ2 278 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 TNKS2Q9H2K2 1166 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms