RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 OR52K1Q8NGK4 314 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 ATP2A3Q93084 1043 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 ELSPBP1Q96BH3 223 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 MRGPRX2Q96LB1 330 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 XPO6Q96QU8 1125 aaKnown RBP13.63□□□□□ -0.23
VMP1-217ENST00000593168 RUFY1Q96T51 708 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 EBNA1BP2Q99848 306 aaKnown RBP13.63□□□□□ -0.23
VMP1-217ENST00000593168 SEMA3CQ99985 751 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 TBL1YQ9BQ87 522 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 WDR83Q9BRX9 315 aaKnown RBP13.63□□□□□ -0.23
VMP1-217ENST00000593168 NAT9Q9BTE0 207 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 TMEM109Q9BVC6 243 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 ROPN1BQ9BZX4 212 aaPredicted RBP13.63□□□□□ -0.23
VMP1-217ENST00000593168 ROPN1Q9HAT0 212 aaPredicted RBP13.63□□□□□ -0.23
VMP1-217ENST00000593168 FAM53CQ9NYF3 392 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 UBP1Q9NZI7 540 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 BFARQ9NZS9 450 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 ACTL7AQ9Y615 435 aa13.63□□□□□ -0.23
VMP1-217ENST00000593168 A0A087WUV0 522 aaPredicted RBP13.62□□□□□ -0.23
VMP1-217ENST00000593168 KANSL1LA0AUZ9 987 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 MAGEB16A2A368 324 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 PMPCBO75439 489 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 TMCC1O94876 653 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 EPOP01588 193 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 ADH5P11766 374 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 PHBP35232 272 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 CD86P42081 329 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 WNT3AP56704 352 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 GPX6P59796 221 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 SKOR1P84550 965 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 STAT4Q14765 748 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 ZNF528Q3MIS6 628 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 RALGPS1Q5JS13 557 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 HP1BP3Q5SSJ5 553 aaPredicted RBP13.62□□□□□ -0.23
VMP1-217ENST00000593168 ARMC3Q5W041 872 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 TRIM68Q6AZZ1 485 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 VITQ6UXI7 678 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 C3orf62Q6ZUJ4 267 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 IGDCC3Q8IVU1 814 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 IPMKQ8NFU5 416 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 SHDQ96IW2 340 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 NUDCD1Q96RS6 583 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 SH3GL2Q99962 352 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 CCDC77Q9BR77 488 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 ARNT2Q9HBZ2 717 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 SPATA6Q9NWH7 488 aaPredicted RBP13.62□□□□□ -0.23
VMP1-217ENST00000593168 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 CHMP2BQ9UQN3 213 aa13.62□□□□□ -0.23
VMP1-217ENST00000593168 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.62□□□□□ -0.23
VMP1-217ENST00000593168 LOC285095A0A1B0GVY8 99 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 INSIG1O15503 277 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 USP12O75317 370 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 ECI2O75521 394 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 TCEA3O75764 348 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 MT-CO1P00395 513 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 CPP00450 1065 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 SERPINF2P08697 491 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 CISD3P0C7P0 127 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 ARSAP15289 507 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 PSMC3P17980 439 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 MGAT1P26572 445 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 CSNK1DP48730 415 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 NUMBP49757 651 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 SERPINH1P50454 418 aaKnown RBP13.61□□□□□ -0.23
VMP1-217ENST00000593168 SESN2P58004 480 aaPredicted RBP13.61□□□□□ -0.23
VMP1-217ENST00000593168 ZNF844Q08AG5 666 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 IFFO1Q0D2I5 559 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 NR1H3Q13133 447 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 IHHQ14623 411 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 MLF2Q15773 248 aaPredicted RBP13.61□□□□□ -0.23
VMP1-217ENST00000593168 CEP85LQ5SZL2 805 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 UBAP2Q5T6F2 1119 aaKnown RBP13.61□□□□□ -0.23
VMP1-217ENST00000593168 DENND5AQ6IQ26 1287 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 LINGO4Q6UY18 593 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 YAF2Q8IY57 180 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 AHI1Q8N157 1196 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.61□□□□□ -0.23
VMP1-217ENST00000593168 DNAAF3Q8N9W5 541 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 WFIKKN2Q8TEU8 576 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 STAMBPL1Q96FJ0 436 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 FICDQ9BVA6 458 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 IL22Q9GZX6 179 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 EBF3Q9H4W6 596 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 ECT2Q9H8V3 914 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 MED4Q9NPJ6 270 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 LHX3Q9UBR4 397 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 ZC3H7BQ9UGR2 993 aaKnown RBP13.61□□□□□ -0.23
VMP1-217ENST00000593168 FBXO4Q9UKT5 387 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 HS3ST2Q9Y278 367 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 SLC27A6Q9Y2P4 619 aa13.61□□□□□ -0.23
VMP1-217ENST00000593168 GPR179Q6PRD1 2367 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 LAMTOR5O43504 91 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 AGTP01019 485 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 SHBGP04278 402 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 CD72P21854 359 aa13.6□□□□□ -0.23
VMP1-217ENST00000593168 SSTR1P30872 391 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms