RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RAD51BO15315 384 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 IPO7O95373 1038 aaKnown RBP11.65□□□□□ -0.54
VMP1-211ENST00000591315 GNSP15586 552 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 PECAM1P16284 738 aaPredicted RBP11.65□□□□□ -0.54
VMP1-211ENST00000591315 CR2P20023 1033 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SERPINB6P35237 376 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 HOXD12P35452 270 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SCNN1BP51168 640 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 KIF19Q2TAC6 998 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 KAZNQ674X7 775 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SLC9A4Q6AI14 798 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 HORMAD1Q86X24 394 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 MINDY1Q8N5J2 469 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 CEP76Q8TAP6 659 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 PPP1R16AQ96I34 528 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SERAC1Q96JX3 654 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SMIM14Q96QK8 99 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 PSKH2Q96QS6 385 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 CEP41Q9BYV8 373 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 CPEB1Q9BZB8 566 aaKnown RBP11.65□□□□□ -0.54
VMP1-211ENST00000591315 SUV39H2Q9H5I1 410 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 NOD2Q9HC29 1040 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 NT5MQ9NPB1 228 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 LUC7LQ9NQ29 371 aaKnown RBP11.65□□□□□ -0.54
VMP1-211ENST00000591315 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SEPT3Q9UH03 358 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 CDV3Q9UKY7 258 aaKnown RBP11.65□□□□□ -0.54
VMP1-211ENST00000591315 PACSIN2Q9UNF0 486 aaPredicted RBP11.65□□□□□ -0.54
VMP1-211ENST00000591315 PCDHGC4Q9Y5F7 938 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 SNX11Q9Y5W9 270 aa11.65□□□□□ -0.54
VMP1-211ENST00000591315 ARID1BQ8NFD5 2236 aaPredicted RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 IGLON5A6NGN9 336 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 GOLGA8CPA6NN73 597 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 PRR5-ARHGAP8B1AHC4 643 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 H0Y8X5 98 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 KCNK1O00180 336 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 APOL1O14791 398 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 SLC30A4O14863 429 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 TM4SF5O14894 197 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 AREL1O15033 823 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 FTCDO95954 541 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 MMP13P45452 471 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 ID4P47928 161 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 CSNK1DP48730 415 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 CLDN2P57739 230 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 GSDMDP57764 484 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 ARHGAP8P85298 464 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 CCZ1BP86790 482 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 DSC2Q02487 901 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 RAD51Q06609 339 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 TRAF2Q12933 501 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 ZNF235Q14590 738 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 RFTN1Q14699 578 aaPredicted RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 TMEM259Q4ZIN3 620 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 TTC7BQ86TV6 843 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 PRPF39Q86UA1 669 aaKnown RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 TRIM69Q86WT6 500 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 KATNAL2Q8IYT4 538 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 TEX26Q8N6G2 289 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 CCNYQ8ND76 341 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 NETO1Q8TDF5 533 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 MAML1Q92585 1016 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 ALG3Q92685 438 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 HAUS1Q96CS2 278 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 LRIG1Q96JA1 1093 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 TSGA13Q96PP4 275 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 MGME1Q9BQP7 344 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 WRAP53Q9BUR4 548 aaKnown RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 OSBPL1AQ9BXW6 950 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 C10orf88Q9H8K7 445 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 PREBQ9HCU5 417 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 PCDH12Q9NPG4 1184 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 TMEM9BQ9NQ34 198 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 AASDHPPTQ9NRN7 309 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 SUSD2Q9UGT4 822 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 ANKRD6Q9Y2G4 727 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 FNDC3AQ9Y2H6 1198 aaKnown RBP11.64□□□□□ -0.55
VMP1-211ENST00000591315 CAPN6Q9Y6Q1 641 aa11.64□□□□□ -0.55
VMP1-211ENST00000591315 hCG_1818297A0A087WSY0 165 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 A0A0U1RQS6 177 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 TSPAN11A1L157 253 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 GOLGA6L3A6NEY3 463 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 A8MX80 341 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 ZNF487B1APH4 448 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 TRAFD1O14545 582 aaPredicted RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 MATN3O15232 486 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 CST8O60676 142 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 MMP20O60882 483 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 PAK4O96013 591 aaPredicted RBP11.63□□□□□ -0.55
VMP1-211ENST00000591315 JCHAINP01591 159 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 HLA-DQB2P05538 268 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 DPP6P42658 865 aa11.63□□□□□ -0.55
VMP1-211ENST00000591315 PEX5P50542 639 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms