RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CFAP47Q6ZTR5 3102 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.81■□□□□ 0.28
GCDH-213ENST00000590627 MAP3K13O43283 966 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 ATP9BO43861 1147 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 TMCC1O94876 653 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 CEACAM1P13688 526 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 ETS1P14921 441 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 RPL22P35268 128 aaKnown RBP16.81■□□□□ 0.28
GCDH-213ENST00000590627 ACTN2P35609 894 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 HSPA9P38646 679 aaKnown RBP16.81■□□□□ 0.28
GCDH-213ENST00000590627 CTSOP43234 321 aaPredicted RBP16.81■□□□□ 0.28
GCDH-213ENST00000590627 E2F5Q15329 346 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 PPP1R7Q15435 360 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 PTPRNQ16849 979 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 MAP7D1Q3KQU3 841 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 ALG1LQ6GMV1 187 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 LEKR1Q6ZMV7 388 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 SYT12Q8IV01 421 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 BBS5Q8N3I7 341 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 SH2D3CQ8N5H7 860 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 CCDC110Q8TBZ0 833 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 RLN3Q8WXF3 142 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 ISG20Q96AZ6 181 aaKnown RBP16.81■□□□□ 0.28
GCDH-213ENST00000590627 NUSAP1Q9BXS6 441 aaKnown RBP16.81■□□□□ 0.28
GCDH-213ENST00000590627 CIPCQ9C0C6 399 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 CEP44Q9C0F1 390 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 ACTL7AQ9Y615 435 aa16.81■□□□□ 0.28
GCDH-213ENST00000590627 TCRBV21S2A2A0A5A6 115 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 BHMG1C9JSJ3 638 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 ZBTB24O43167 697 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 HLA-DQB2P05538 268 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 ZSCAN5DPP0CG00 497 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 SRCP12931 536 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 CD68P34810 354 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 HOXD12P35452 270 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 PI4KAP42356 2102 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 NUMBP49757 651 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 DRG2P55039 364 aaKnown RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.28
GCDH-213ENST00000590627 ZNF235Q14590 738 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 TRIM61Q5EBN2 209 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 CCDC70Q6NSX1 233 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 PID1Q7Z2X4 250 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 PLPP6Q8IY26 295 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 PGBD3Q8N328 593 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 PGBD5Q8N414 524 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 ZNF513Q8N8E2 541 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 ATP11CQ8NB49 1132 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 UCMAQ8WVF2 138 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 HMGB4Q8WW32 186 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 MYO19Q96H55 970 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 MGME1Q9BQP7 344 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 ERP44Q9BS26 406 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 CINPQ9BW66 212 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 KLHL8Q9P2G9 620 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 MBD1Q9UIS9 605 aaPredicted RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 PLA2G4CQ9UP65 541 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 FRYQ5TBA9 3013 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 GON4LQ3T8J9 2241 aa16.8■□□□□ 0.28
GCDH-213ENST00000590627 ASCC3Q8N3C0 2202 aaKnown RBP16.8■□□□□ 0.28
GCDH-213ENST00000590627 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 K7ERQ8 282 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 GIPC1O14908 333 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 NPC1O15118 1278 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 SMAD6O43541 496 aaKnown RBP16.79■□□□□ 0.28
GCDH-213ENST00000590627 ZNF821O75541 412 aaPredicted RBP16.79■□□□□ 0.28
GCDH-213ENST00000590627 NEBLO76041 1014 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 PROS1P07225 676 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 CES1P23141 567 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 IVDP26440 423 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 PTGER3P43115 390 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 CSNK1DP48730 415 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 STK19P49842 368 aaPredicted RBP16.79■□□□□ 0.28
GCDH-213ENST00000590627 PEAR1Q5VY43 1037 aaPredicted RBP16.79■□□□□ 0.28
GCDH-213ENST00000590627 LYSMD4Q5XG99 296 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 DUPD1Q68J44 220 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 SLC23A3Q6PIS1 610 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 ARHGEF18Q6ZSZ5 1173 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 PRUNE1Q86TP1 453 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 KLHDC8BQ8IXV7 354 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 TMEFF1Q8IYR6 380 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 CYB5D2Q8WUJ1 264 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 SORCS1Q8WY21 1168 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 SEC14L1Q92503 715 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 RPL10LQ96L21 214 aaKnown RBP16.79■□□□□ 0.28
GCDH-213ENST00000590627 FCRL5Q96RD9 977 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 TRIM51Q9BSJ1 452 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 CEP41Q9BYV8 373 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 RAB17Q9H0T7 212 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 GBA3Q9H227 469 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 GLOD4Q9HC38 313 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 NT5MQ9NPB1 228 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 THAP10Q9P2Z0 257 aaPredicted RBP16.79■□□□□ 0.28
GCDH-213ENST00000590627 LHX3Q9UBR4 397 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 SLCO3A1Q9UIG8 710 aa16.79■□□□□ 0.28
GCDH-213ENST00000590627 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms