RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 METAP1P53582 386 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 ATXN3P54252 364 aaPredicted RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 ADPRHP54922 357 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 SNRPD1P62314 119 aaKnown RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 CCZ1BP86790 482 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 CCZ1P86791 482 aaPredicted RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 SLC25A11Q02978 314 aaKnown RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 CNTN1Q12860 1018 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 DPYSQ14117 519 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 MESDQ14696 234 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 SPA17Q15506 151 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 ZFYVE27Q5T4F4 411 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 STPG1Q5TH74 334 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 TBC1D3GQ6DHY5 549 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 TBC1D3CQ6IPX1 549 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 TMTC1Q8IUR5 882 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 RHOT2Q8IXI1 618 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 TBC1D3Q8IZP1 549 aaPredicted RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 ZCCHC9Q8N567 271 aaKnown RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 LZTR1Q8N653 840 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 CHST14Q8NCH0 376 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 SLC35G2Q8TBE7 412 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 CASKIN2Q8WXE0 1202 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 BIRC7Q96CA5 298 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 TRIM44Q96DX7 344 aaPredicted RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 PPP1R16AQ96I34 528 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 RTKNQ9BST9 563 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 GTPBP2Q9BX10 602 aaKnown RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 KCNF1Q9H3M0 494 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 ZDHHC6Q9H6R6 413 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 LRRC19Q9H756 370 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 RXFP3Q9NSD7 469 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 DLL3Q9NYJ7 618 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 HECAQ9UBI9 543 aaPredicted RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 UBA2Q9UBT2 640 aaPredicted RBP10.54□□□□□ -0.72
SDF2-208ENST00000589788 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
SDF2-208ENST00000589788 SPTBN4Q9H254 2564 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 ADAMTS9Q9P2N4 1935 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 DFFAO00273 331 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 KRIT1O00522 736 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 LEFTY1O75610 366 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 TMCC1O94876 653 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 IPO7O95373 1038 aaKnown RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 POP4O95707 220 aaKnown RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 GSRP00390 522 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CTSLP07711 333 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 ENGP17813 658 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CD27P26842 260 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 MAN1A1P33908 653 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CYLC1P35663 651 aaPredicted RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 MAGEA1P43355 309 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 MAPK8P45983 427 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 PAPOLAP51003 745 aaKnown RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 LIMK1P53667 647 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CDH6P55285 790 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 RHOAP61586 193 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 RAD51Q06609 339 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 INO80DQ53TQ3 878 aaPredicted RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 TXNRD3NBQ6F5E7 133 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 TMCO3Q6UWJ1 677 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 POLNQ7Z5Q5 900 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CCDC170Q8IYT3 715 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 OR2AP1Q8NGE2 309 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 RFFLQ8WZ73 363 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 GDAP1L1Q96MZ0 367 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CSPG4P5Q96PW8 444 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CALN1Q9BXU9 219 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 SLC39A8Q9C0K1 460 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 SP110Q9HB58 689 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 CAPN10Q9HC96 672 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 PCDH18Q9HCL0 1135 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 LUC7LQ9NQ29 371 aaKnown RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 TPX2Q9ULW0 747 aaKnown RBP10.53□□□□□ -0.72
SDF2-208ENST00000589788 USP34Q70CQ2 3546 aa10.53□□□□□ -0.72
SDF2-208ENST00000589788 MYO15AQ9UKN7 3530 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 C4orf47A7E2U8 309 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 J3KR12 359 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 ARHGAP6O43182 974 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 PLRG1O43660 514 aaKnown RBP10.52□□□□□ -0.73
SDF2-208ENST00000589788 PRAMEF11O60813 436 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 IGSF6O95976 241 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 IGHV4-34P06331 123 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 KRT7P08729 469 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 AMPD1P23109 780 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 ITGB7P26010 798 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 SERPINB6P35237 376 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 ARHGAP25P42331 645 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 CCR5P51681 352 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 AFF3P51826 1226 aaKnown RBP10.52□□□□□ -0.73
SDF2-208ENST00000589788 UAP1L1Q3KQV9 507 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 ATXN7L2Q5T6C5 722 aaPredicted RBP10.52□□□□□ -0.73
SDF2-208ENST00000589788 AGBL4Q5VU57 503 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 AFMIDQ63HM1 303 aa10.52□□□□□ -0.73
SDF2-208ENST00000589788 ERN2Q76MJ5 926 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms