RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MYO18AQ92614 2054 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 E7EVH7 732 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 KPNA3O00505 521 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PSMD3O43242 534 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 SOCS5O75159 536 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PMPCBO75439 489 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 SLU7O95391 586 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 ADH1BP00325 375 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PSMD8P48556 350 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 RPS14P62263 151 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 TRAF2Q12933 501 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 SEMA5AQ13591 1074 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PCSK7Q16549 785 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 GLE1Q53GS7 698 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 CFAP58Q5T655 872 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 FAM46CQ5VWP2 391 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 KDELC1Q6UW63 502 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PAF1Q8N7H5 531 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 LRRN4CLQ8ND94 238 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 TSTD1Q8NFU3 115 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PDCD6IPQ8WUM4 868 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 LRRC45Q96CN5 670 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 PPP1R16AQ96I34 528 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 KLHL32Q96NJ5 620 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 TDRD1Q9BXT4 1180 aaKnown RBP15.33■□□□□ 0.04
ATG4D-211ENST00000589753 TECTAO75443 2155 aa15.33■□□□□ 0.04
ATG4D-211ENST00000589753 ERI2A8K979 691 aaKnown RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 EFCAB8A8MWE9 144 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 TRAFD1O14545 582 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 HTRA2O43464 458 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 ALDH1A2O94788 518 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 GABRG2P18507 467 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 NDUFV2P19404 249 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 SLC8A1P32418 973 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 CXCL12P48061 93 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 LMAN1P49257 510 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 CCR3P51677 355 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 TERF1P54274 439 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 WNT3AP56704 352 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 CST6Q15828 149 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 POM121L1PQ3SYA9 428 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 ZNF805Q5CZA5 627 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 ARMC12Q5T9G4 340 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 MAMSTRQ6ZN01 415 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 KLHDC8BQ8IXV7 354 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 FBXL6Q8N531 539 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 IPMKQ8NFU5 416 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 HCAR2Q8TDS4 363 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 HMGB4Q8WW32 186 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 PRCCQ92733 491 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 SIPA1Q96FS4 1042 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 MRGPRX2Q96LB1 330 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 MRGPRX1Q96LB2 322 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 HHIPQ96QV1 700 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 ERP44Q9BS26 406 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 TRIM31Q9BZY9 425 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 RAB17Q9H0T7 212 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 SLC6A17Q9H1V8 727 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 LRRC40Q9H9A6 602 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 DYRK4Q9NR20 520 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 SPATA6Q9NWH7 488 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 CHKBQ9Y259 395 aa15.32■□□□□ 0.04
ATG4D-211ENST00000589753 UTP11Q9Y3A2 253 aaKnown RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 ARIH1Q9Y4X5 557 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-211ENST00000589753 A0A1W2PQ67 120 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 MID1O15344 667 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 FZD6O60353 706 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 PGLSO95336 258 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 AP2A1O95782 977 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 DNTTP04053 509 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 APRTP07741 180 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 C7P10643 843 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 C5AR1P21730 350 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 ITGB7P26010 798 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 IVDP26440 423 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 METAP1P53582 386 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 SLC7A5Q01650 507 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 ZBTB16Q05516 673 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 CDK18Q07002 472 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 SYCP2LQ5T4T6 812 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 KCTD11Q693B1 232 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 BRAT1Q6PJG6 821 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 KIAA1324Q6UXG2 1013 aaKnown RBP15.31■□□□□ 0.04
ATG4D-211ENST00000589753 KDELC2Q7Z4H8 507 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 PGBD3Q8N328 593 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 CAMKK1Q8N5S9 505 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 TMEM105Q8N8V8 129 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 ARRDC3Q96B67 414 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 ECHDC3Q96DC8 303 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 SNF8Q96H20 258 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 FEM1CQ96JP0 617 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 FICDQ9BVA6 458 aa15.31■□□□□ 0.04
ATG4D-211ENST00000589753 PABPC3Q9H361 631 aaKnown RBP15.31■□□□□ 0.04
ATG4D-211ENST00000589753 EIF2B3Q9NR50 452 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms