RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-225ENST00000589710 LIMK2P53671 638 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 EPHA5P54756 1037 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 DNAJC3Q13217 504 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 THOC5Q13769 683 aaKnown RBP20.55■□□□□ 0.88
CIRBP-225ENST00000589710 FAM47EQ6ZV65 393 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 RTL10Q7L3V2 364 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 CACNA2D3Q8IZS8 1091 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 BLOC1S5Q8TDH9 187 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 ATP2A3Q93084 1043 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 SEC16BQ96JE7 1060 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 TREX1Q9NSU2 369 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 NSMCE4AQ9NXX6 385 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 VPS51Q9UID3 782 aa20.55■□□□□ 0.88
CIRBP-225ENST00000589710 MOSPD3O75425 235 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 CYBBP04839 570 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 PRKCGP05129 697 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 FGF1P05230 155 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 HNRNPA1P09651 372 aaKnown RBP eCLIP20.54■□□□□ 0.88
CIRBP-225ENST00000589710 HLA-DPA1P20036 260 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 HOXA9P31269 272 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 TSTD2Q5T7W7 516 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 GRASPQ7Z6J2 395 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-225ENST00000589710 DCLK2Q8N568 766 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 RANBP9Q96S59 729 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 TASP1Q9H6P5 420 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 MKS1Q9NXB0 559 aa20.54■□□□□ 0.88
CIRBP-225ENST00000589710 ZMPSTE24O75844 475 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 TOP3BO95985 862 aaKnown RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 PIRTP0C851 137 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 NEFHP12036 1026 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 TYK2P29597 1187 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 CSE1LP55060 971 aaKnown RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 KIAA0930Q6ICG6 404 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 FSTL4Q6MZW2 842 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 DCAF4L2Q8NA75 395 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 ING5Q8WYH8 240 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 PTPRN2Q92932 1015 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 SLC28A3Q9HAS3 691 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 CHKBQ9Y259 395 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 FCF1Q9Y324 198 aaKnown RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 PLLPQ9Y342 182 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 TRANK1O15050 2925 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 CCDC195A0A1B0GUA6 201 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 E2F8A0AVK6 867 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 TIMM44O43615 452 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 ARNTP27540 789 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 ARCN1P48444 511 aaKnown RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 SERPINB8P50452 374 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 RHOAP61586 193 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 ZNF470Q6ECI4 717 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 MICALCLQ6ZW33 695 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 CMC1Q7Z7K0 106 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 DENND6AQ8IWF6 608 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 APCDD1Q8J025 514 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 OTUD6BQ8N6M0 293 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 ACMSDQ8TDX5 336 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 VPS39Q96JC1 886 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 C2orf49Q9BVC5 232 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 SNX15Q9NRS6 342 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 TDP1Q9NUW8 608 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 CLEC4EQ9ULY5 219 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 MTO1Q9Y2Z2 717 aaKnown RBP20.53■□□□□ 0.88
CIRBP-225ENST00000589710 OR51B4Q9Y5P0 310 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 HCFC2Q9Y5Z7 792 aa20.53■□□□□ 0.88
CIRBP-225ENST00000589710 NDST3O95803 873 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 CD160O95971 181 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 CR2P20023 1033 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 SLC1A2P43004 574 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 ETV4P43268 484 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 MPP1Q00013 466 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 CTBP1Q13363 440 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 PDE1CQ14123 709 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-225ENST00000589710 ADGRD2Q7Z7M1 963 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 LEMD2Q8NC56 503 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 ARMC2Q8NEN0 867 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 USP13Q92995 863 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-225ENST00000589710 TIFAQ96CG3 184 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 RMDN1Q96DB5 314 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 NUDCD1Q96RS6 583 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 FAM167BQ9BTA0 163 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 PITPNM3Q9BZ71 974 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 VPS11Q9H270 941 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 CAB39LQ9H9S4 337 aa20.52■□□□□ 0.88
CIRBP-225ENST00000589710 CCL22O00626 93 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 PRAMEF12O95522 483 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 CRHR1P34998 444 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 LMAN2Q12907 356 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 MSLNQ13421 630 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-225ENST00000589710 PPM1JQ5JR12 505 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 PDE12Q6L8Q7 609 aaKnown RBP20.51■□□□□ 0.87
CIRBP-225ENST00000589710 CNPY4Q8N129 248 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 CCDC63Q8NA47 563 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 CCDC197Q8NCU1 140 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 RIN3Q8TB24 985 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 PDCD6IPQ8WUM4 868 aaKnown RBP20.51■□□□□ 0.87
CIRBP-225ENST00000589710 ZNF75CPQ92670 426 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-225ENST00000589710 ALG14Q96F25 216 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 NSMCE3Q96MG7 304 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 PIDD1Q9HB75 910 aa20.51■□□□□ 0.87
CIRBP-225ENST00000589710 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms