RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 INSL6Q9Y581 213 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 IRAK3Q9Y616 596 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 MICAL3Q7RTP6 2002 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 VCANP13611 3396 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 TET1Q8NFU7 2136 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 KIAA0100Q14667 2235 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 ANKRD65E5RJM6 399 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 TRAFD1O14545 582 aaPredicted RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 TEX28O15482 410 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 INSIG1O15503 277 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 TRIM13O60858 407 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 FGF18O76093 207 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 LRG1P02750 347 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 KLKB1P03952 638 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 DLDP09622 509 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 ATXN1LP0C7T5 689 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 RALBP11234 206 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 MYL4P12829 197 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 STMN1P16949 149 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 HDCP19113 662 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 PSMA3P25788 255 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 DDX6P26196 483 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■□□ 17.1
VPS25-203ENST00000589520 HOXD9P28356 352 aaPredicted RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 SERPINB5P36952 375 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 ACVRL1P37023 503 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 SLC7A9P82251 487 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 SMAD3P84022 425 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 KRT72Q14CN4 511 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 PCSK7Q16549 785 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 SIRPB2Q5JXA9 342 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 MBLAC2Q68D91 279 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 MRNIPQ6NTE8 343 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 RFWD3Q6PCD5 774 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 SDCCAG8Q86SQ7 713 aaPredicted RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 CPXM2Q8N436 756 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 ZNF557Q8N988 423 aaPredicted RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 GPR150Q8NGU9 434 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 OR6Y1Q8NGX8 325 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 STON2Q8WXE9 905 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 CLP1Q92989 425 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 TMA16Q96EY4 203 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 ZNF419Q96HQ0 510 aaPredicted RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 RMDN2Q96LZ7 410 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 GCNAQ96QF7 691 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 NUDCD1Q96RS6 583 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 SPON2Q9BUD6 331 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 ADGRE3Q9BY15 652 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 RNF38Q9H0F5 515 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 C12orf65Q9H3J6 166 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 ALG13Q9NP73 1137 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 TMEM216Q9P0N5 145 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 PRKAG2Q9UGJ0 569 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 EMCNQ9ULC0 261 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 SLC39A10Q9ULF5 831 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 APOBEC2Q9Y235 224 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 CHKBQ9Y259 395 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 VPS9D1Q9Y2B5 631 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 NUP205Q92621 2012 aa10.48□□□□□ -0.73
VPS25-203ENST00000589520 MYO18AQ92614 2054 aaKnown RBP10.48□□□□□ -0.73
VPS25-203ENST00000589520 A0A0G2JND7 137 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 FAM95CA0A1B0GW59 222 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 CCDC189A1A4V9 331 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 SLCO1B7G3V0H7 640 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 RASSF9O75901 435 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 KLHL2O95198 593 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 CXCL14O95715 111 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 GLP2RO95838 553 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 GSRP00390 522 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 RBP1P09455 135 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 MYL2P10916 166 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 CR2P20023 1033 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 OGNP20774 298 aaKnown RBP10.47□□□□□ -0.73
VPS25-203ENST00000589520 MAPK8P45983 427 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 SLC1A6P48664 564 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 ABCE1P61221 599 aaKnown RBP10.47□□□□□ -0.73
VPS25-203ENST00000589520 MAXP61244 160 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 PRAMEP78395 509 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 ZBTB16Q05516 673 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 SLC20A2Q08357 652 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 SEPT6Q14141 434 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 GRM3Q14832 879 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
VPS25-203ENST00000589520 MPPE1Q53F39 396 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 RETSATQ6NUM9 610 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 FAM117BQ6P1L5 589 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 LILRA6Q6PI73 481 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 Q6ZNB5 142 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 HTR3DQ70Z44 454 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 CFAP52Q8N1V2 620 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 PGBD5Q8N414 524 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 LEMD2Q8NC56 503 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 ACDQ96AP0 544 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 ERP27Q96DN0 273 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 CCDC126Q96EE4 140 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 ZNF778Q96MU6 729 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 TCF12Q99081 682 aa10.47□□□□□ -0.73
VPS25-203ENST00000589520 MUC3BQ9H195 1237 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms