RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 C1orf21Q9H246 121 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 PRDM16Q9HAZ2 1276 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 CNGB3Q9NQW8 809 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 MARCOQ9UEW3 520 aaPredicted RBP14.83□□□□□ -0.03
CCDC43-203ENST00000588210 EMCNQ9ULC0 261 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 MUC3AQ02505 3323 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 C2orf78A6NCI8 922 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 USP17L7P0C7H9 530 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 HDCP19113 662 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 AMPD1P23109 780 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 ACADSBP45954 432 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 ATXN1P54253 815 aaKnown RBP14.83□□□□□ -0.04
CCDC43-203ENST00000588210 ADIGQ0VDE8 80 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 TDGQ13569 410 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 FASTKD1Q53R41 847 aaKnown RBP14.83□□□□□ -0.04
CCDC43-203ENST00000588210 TANGO2Q6ICL3 276 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 STRADAQ7RTN6 431 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 CCNJLQ8IV13 435 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 SCUBE1Q8IWY4 988 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 SLC44A3Q8N4M1 653 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 CCDC185Q8N715 623 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 PPFIBP2Q8ND30 876 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 CLEC4CQ8WTT0 213 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 CDKL2Q92772 493 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 OBP2AQ9NY56 170 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 ANGPTL2Q9UKU9 493 aa14.83□□□□□ -0.04
CCDC43-203ENST00000588210 CIB2O75838 187 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 OLFM2O95897 454 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 TOP3BO95985 862 aaKnown RBP14.82□□□□□ -0.04
CCDC43-203ENST00000588210 PDHA1P08559 390 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 KITP10721 976 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 LCP1P13796 627 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 AOC1P19801 751 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 RCN2Q14257 317 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 HECTD3Q5T447 861 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 C6orf163Q5TEZ5 329 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 PACS1Q6VY07 963 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 ULK2Q8IYT8 1036 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
CCDC43-203ENST00000588210 ARL14EPQ8N8R7 260 aaPredicted RBP14.82□□□□□ -0.04
CCDC43-203ENST00000588210 CYP2S1Q96SQ9 504 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 KXD1Q9BQD3 176 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 RPP25Q9BUL9 199 aaKnown RBP14.82□□□□□ -0.04
CCDC43-203ENST00000588210 ULBP1Q9BZM6 244 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 TDP1Q9NUW8 608 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 CLIC5Q9NZA1 410 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.82□□□□□ -0.04
CCDC43-203ENST00000588210 NUP210Q8TEM1 1887 aaPredicted RBP14.82□□□□□ -0.04
CCDC43-203ENST00000588210 MYO10Q9HD67 2058 aa14.82□□□□□ -0.04
CCDC43-203ENST00000588210 DPPA5A6NC42 116 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PRR5-ARHGAP8B1AHC4 643 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 TNFRSF10AO00220 468 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 FBXO21O94952 628 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ALDOAP04075 364 aaKnown RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 CKMP06732 381 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PGAM1P18669 254 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 VIPR2P41587 438 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ALDH18A1P54886 795 aaKnown RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ARHGAP8P85298 464 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 TUBB3Q13509 450 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ZCCHC23Q6ZST2 131 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 WDR75Q8IWA0 830 aaKnown RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ST13P5Q8NFI4 369 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PIWIL2Q8TC59 973 aaKnown RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 DTX3LQ8TDB6 740 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 IRGQQ8WZA9 623 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ZNF778Q96MU6 729 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 SLC22A12Q96S37 553 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 NAT9Q9BTE0 207 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 NMUR1Q9HB89 426 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 MUTYHQ9UIF7 546 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 MFHAS1Q9Y4C4 1052 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 MYO16Q9Y6X6 1858 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 A0A1W2PQH9 124 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 TPP1O14773 563 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 MAP3K7O43318 606 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PLIN3O60664 434 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 OPHN1O60890 802 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PRAMEF12O95522 483 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 GOT1P17174 413 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ARL4AP40617 200 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PGFP49763 221 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 ACTR3P61158 418 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 SLC7A9P82251 487 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 KDSRQ06136 332 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 TEDDM1Q5T9Z0 273 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 N4BP2L1Q5TBK1 243 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 RIPOR1Q6ZS17 1223 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 SCD5Q86SK9 330 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 MYLK4Q86YV6 388 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PSTKQ8IV42 348 aaKnown RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 MFSD6LQ8IWD5 586 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 UNC5BQ8IZJ1 945 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PPP1R14CQ8TAE6 165 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 RILPQ96NA2 401 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 PANX3Q96QZ0 392 aa14.81□□□□□ -0.04
CCDC43-203ENST00000588210 CDK5RAP1Q96SZ6 601 aaKnown RBP14.81□□□□□ -0.04
CCDC43-203ENST00000588210 EBF4Q9BQW3 602 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms