RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 TMEM121BQ9BXQ6 578 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 SUV39H2Q9H5I1 410 aa20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 SP110Q9HB58 689 aa20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 FTSJ1Q9UET6 329 aa20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 IPO11Q9UI26 975 aaKnown RBP20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 MSRB2Q9Y3D2 182 aa20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 HS3ST3A1Q9Y663 406 aa20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 ARID1BQ8NFD5 2236 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC6A-203ENST00000587818 PLXNB3Q9ULL4 1909 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 CEP295Q9C0D2 2601 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 AKAP13Q12802 2813 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 MYO1FO00160 1098 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 AREL1O15033 823 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 PRKCGP05129 697 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 ARL4AP40617 200 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 ADKP55263 362 aaKnown RBP20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 DPYSL2Q16555 572 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 KANSL1Q7Z3B3 1105 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 PTAR1Q7Z6K3 402 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 VSTM4Q8IW00 320 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 SLC22A18ASQ8N1D0 253 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 GATA6Q92908 595 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 CNDP2Q96KP4 475 aaKnown RBP20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 CSPG4P5Q96PW8 444 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 KLF6Q99612 283 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 CHP1Q99653 195 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 WRAP53Q9BUR4 548 aaKnown RBP20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 CPEB1Q9BZB8 566 aaKnown RBP20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 PCDH18Q9HCL0 1135 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 CTTNBP2NLQ9P2B4 639 aa20.27■□□□□ 0.84
TRAPPC6A-203ENST00000587818 PTPRBP23467 1997 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 MUSKO15146 869 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 PROS1P07225 676 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 XPAP23025 273 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 GJC1P36383 396 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 SLC25A11Q02978 314 aaKnown RBP20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 IL10RBQ08334 325 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 MMRN1Q13201 1228 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ASTE1Q2TB18 679 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 INAVAQ3KP66 663 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ABI3BPQ7Z7G0 1075 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 SLC25A45Q8N413 288 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 OXR1Q8N573 874 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 NIPA2Q8N8Q9 360 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ZNF564Q8TBZ8 553 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 NSMCE3Q96MG7 304 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 CINPQ9BW66 212 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 KLHL11Q9NVR0 708 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 UCKL1Q9NWZ5 548 aa20.26■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ENC1O14682 589 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 YKT6O15498 198 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 CD48P09326 243 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 CDH6P55285 790 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 SLC10A7Q0GE19 358 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TPRG1LQ5T0D9 272 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ZSWIM9Q86XI8 627 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 DNAJC7Q99615 494 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 DKK3Q9UBP4 350 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 COQ6Q9Y2Z9 468 aa20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 GOLGA4Q13439 2230 aaKnown RBP20.25■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ANKRD36A6QL64 1941 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 FAM221BA6H8Z2 402 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 A6NNZ2 444 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TMEM110-MUSTN1A8MSY1 372 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 FPGTO14772 594 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 KRT37O76014 449 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 IL4RP24394 825 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 SCNN1BP51168 640 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ZNF135P52742 658 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 CLDN6P56747 220 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 KRT81Q14533 505 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 SLC18A3Q16572 532 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TMCO3Q6UWJ1 677 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 DHRS13Q6UX07 377 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 LZTR1Q8N653 840 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 CXorf40AQ8TE69 158 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TEKT4Q8WW24 435 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 LENG8Q96PV6 779 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 DEF6Q9H4E7 631 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 PCDH12Q9NPG4 1184 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 MBNL1Q9NR56 388 aaKnown RBP20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 ZNHIT6Q9NWK9 470 aaKnown RBP20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 FRYQ5TBA9 3013 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 EPG5Q9HCE0 2579 aa20.24■□□□□ 0.83
TRAPPC6A-203ENST00000587818 SHROOM3Q8TF72 1996 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 FAM149AA5PLN7 773 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TRIM38O00635 465 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 AKR1B10O60218 316 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TM7SF2O76062 418 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 DKK1O94907 266 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 H2AFZP0C0S5 128 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 DGKAP23743 735 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TAS2R40P59535 323 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 FZD2Q14332 565 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 LBRQ14739 615 aaKnown RBP20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 UGP2Q16851 508 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TSR1Q2NL82 804 aaKnown RBP20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 LRRK1Q38SD2 2015 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 TMEM52BQ4KMG9 183 aa20.23■□□□□ 0.83
TRAPPC6A-203ENST00000587818 H2AFVQ71UI9 128 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms